| Id Trinity | TRINITY_DN50529_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_404731 |
| Sequence | CTGTTTCAGGAACTCCATCAAAGCTGCTTCCATCTGGATCTGGAATTCCCTTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAGCTTCAGAAGAA GGACACATATGGTGTGTATGCTGAGCCTGTTGATCCAGAAGAGCTCCCTGATTACCATGATGTAGTCGACCATCCCATGGATTTTGCCACTGTCAGGAAT AAGTTGGCAAATGGATCTTATCCTACCTTGGAACAATTTGAGGTTTGTAAATATGTTTCAGTTATTCATGATTGGACTTGTGGGAAATTTATTTGTTGTT GTTGTAGAGTATACAGTATTAATGGGGATTATGTGGAATTTAGCCTAAGTTATAGATGAGATTTTGTATCCACTAAATATGTTTTTAACCTACTGATAGA TTGAGTTTGGTAAAGACATAGAAGCTAGAGGAATTTTTTTCCATTTTCCATTCCATTGTAATTTTGCTTGTTTCGGAGTTGAATAGATGATAGTGTTCTT TAATCGTTGGTAATAATGCAGCTTTGCTCTTAGGGACATGGACATAGAACCGTAAAACATTATCCTTATGGTTTGGTCATATATGATATCCCTGTGGTTC GCTGCCTGACCTCAAATCCTTGCTCTTGCAGTTAGATGTACAAAAATCTGAGATAGAAGTTTAATCTGGAAATCAATTACGGCCCTTTAGACCATGATGA TGTTAATAGGCATTGGAGGAATATATCATGGTTCCTATTAATTTTCTGTTTGGAACTCACAGCGGGATCTTCTTTTAGATGAATGAGAAGAAAATAATGT TTGCAATTTGTTTTCTCGCCAACTACTGTGGCTTTCATCTGTAGATACTAGGTAGCCTGTGATTATCATCATGATATTAATTAAGGCAAGAATTCTTGCT AAGAAGAATGCCCATGTTGTGGACTTGTTTTTTAACTGATTGATCCCTTTATTGCATAAGAATCCCTGGTTTAATAGTTTTGTTTGTTAAATCATCTGAA TAAATTTAAAATGTGCTCCTGTGCATAGATATTGTCTTCCCGTTTAAGTTGGATATTGAAAGACAGTATTTTACTATTATTACCTTGACTTCTGAATGCA GAGTGATATATTTTTGATTTGCTCAAATGCAATGCAATACAATGCACCAGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTTGCACGGAAA AAGTTTGAGAAGTTGAGAATTGACTTTGAACGCTCTCATAGTGAGCTGAAATCTTCCGATCAAAAGACTAGGCCTAATTCTTTGGTTAAGAAGCTTGCAA AGAAGTCAGTGGGTGCTTCACAGGAACCTATTGGCCCTGATTTCTCCTCTGGTGCAACTCTTGCTACCCTTGGAGATGTACAACCAACTTCCCATCCAAT GCAAGGTGTCATCTATGAAAGGCCTGGCAACGTTGACGGCCTCGTGGAGGGGAATGCTTTCTTCATTGACTCAAATCAAGAGAAAGCTGAAGACGTTTTA TCAGGGAAGGGTACAGTCTCCAAGCTGGGAAGGAAGCCATCTGTGCAAGATTATGAACGTCGTGCAACTTATAATATGTCTAATCAACCAATTAGTAGAT CAGATTCGATATTTACAACCTTTGAAAGTGAAATCAAGCAGCTAGTTACTGTCGGACTTCAAGCTGAATATTCTTATGCTAGGAGTTTGGCTCGTTTTGC TGCAACACTGGGACCTGCTGCTTGGGAAATTGCTTCCCAAAAGATTCAGCAGGCACTCCCACCTGGCTGTAAGTTTGGTCGTGGTTGGGTTGGAGAATAT GAACCACCTCCAACCCCAGTATTAATATTTGATAATGTTGTCCAGAAAGAACCTAATCTGATAAAGAAGTTGCAGTCTACTACTGAATCAATAAAGGCTG ACAAAAACAGTAAGAATGTGGAATCCACCACACAACAACCTGTTAATGGACCAATGGTTGAGGGAAAACAGCCTTCAGTTCATCCCGGCAGCTGGCCTAC ATTAGAAGGAAAACCATCTTTGTTTGGTTCTGTGGGTGTAAGACCCAACACTCCTGTCAATCCCCCTCATCAGCAACCTAACGTCCAAACCAGGAACCTT GGCAAGTCCAAGAATAAGGGTTTGAAACAAGTAGAACTGAACTCTTTACCACCAACTGATCAGAATAATGCGAGTCTAGTTGTGAAGCTTACCAATAATG CTCCTGCCTCTGCTACAAAACCCAGAGAGATGGTACCATGTAACACAAATATTTCACCATCTATGCCTTTCAAGCAGCCAGATACTAATGGTGTTGTTAG TGGTGACATGCCTAATGGAAAAGTCAGGAATACTACTATGAATAGACGAATGCCTGGTCCATCTGAGAGTACATCAAATCAAACAGGCAGAACAGCTCCC TTTATTGTCCATGGACAACCATCACCTGAGAGCACATCAAATCAAACAGGAAGAGCAGCTCCCTTTTTTGCCCGTGGACAACCATCACGTGAGAGCACAA CGAATCAGATAGGAAGAGCAGCTGCCATTGTTTCCCATGGGCAACCATCACCTGAGAGCACATCAAATCAGACAGGAAGAGCAGTTCACTTTGTTTCCCA TGGACAACCATCACCTGAGAACACATTGAATCAAACAGGAAGAGCAGCTCCATTTGTTACCCATGGACAAGAGCAGAGTCTTAGTGACCCAGTTCAGCTG ATGAGGATCTTAGCCGAAAAGGCTCAAAAACAACAACAAACTTCCAGTTCTTCTAATCATTCCCCTGTTGATACTCCACCAGGGGTACCATCTGGACAGA GAGATGGCACGGGCAACGCTTCAGCAGCAGCTGCCCGGGCATGGATGTCTGTAGGAGCAGGAGGGTTTAAACAAGGGCCTGAGAGTCCTAGTCCTAATTC ACCCAAAAATCAGATTTCTGCAGATTCATTGTATAATCCAGTGAGAGAGTTCCATCAGCATATGTCACGAATTCGCGGGGAGTTTCCGTCTACTGGAATG TCTTTCCAGTCCGATAAGAACAATTTTCCATTTCAGGCACTTGCACATCAACCTATGCACCCCGTTAGTGTTTCTCAGTTTCAAAACCGACCGACTGTTT TCCCTCAAGTAGCAGCACCCTCTGACCTGTCAAGATTTCAAATGCAACCACCTTGGCAAGGTATCCGGCCTCCTAGTCAACCGAGACAGAAACAGGAAAC ACTTCCTCCCGACTTGAATATTGGTTTCCAATCTCCCGGGTCACCTGTGAAACAATCTTCCGGTGTGATGGTTGACTCACAGCAACCAGACCTAGCGTTG CAACTATGAATTGCATTGCAATTTTGGTGGGCATGTTTCCGTAAGAACTTGTTTATGGAATTTTCATCTCCTGTCATAGGATGTTGATTTTGATTCAAAG AGCCTTGCATGAATGAGGAAAGGGCTACCATTTTGTACTTCTGGAAGAGATGAAAAAAATATCATGTGCCAGGGAGATACTATCCCTTGGATCTTATGGT TTTCTTGAGTGGGATTTGGCTTTTGGCACAAGGCTGGTCAAAATCAGTTTGTTTGCATTTAGAAGACACTGGTGAATTTGGCAGACAGAAGTTAACTCCA TGCGACTTTCCTTCTTTTCCAAATATCGATTATTAAGATATTGCAGCGTGTTCCTGTTCTATCCAGGAGTTGTAACCCTAGGTTGTTATTAATTGATGAT TATGATCAACAGCAGTGCTTAGATTTTTCAATTTGCTGGCGAAAAATGCTATTGATGCCGTGTACATTCTTTACAAATGGGTGATGAAATTTAGTTGTCT AGATATTAATTTCCTTTGATGATTACTAATGTATCTGAATTGGTGGTAAGGCAATAGCATGCACATGAGATTTACATGTCACCAATGCAAAACCATAAGT ATGCTTGCCATTTCATCAAAAATTGTTCTGTTTTTTTCATCTCTGTATTGTTGCTTCTCTGTGTATATGCTCAGATTTATCTGAGATAGTGTTTCATTCC TCATCATCTCAGTTGAAAATGTGATTATTATATTTTTTAAAAAGAAAATCAATTTACCAGGTGTTCTATCATGAAGAAACGGGATCGTTTTAGGTCTCAA GTCAGAGTCTCCCAATATGCTGCTTGTCCACTATATGCAGGAAATGTTGCAGGAAATGTAATAAAAGTAAAGCTAATCTGCAACATATATTACTCTCTGT TTAATTTTAATTATAGTTTTGGAATATGTAGTTTTATTTTAATTGAAGAGTTGACCATTTTTTGTCATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177870; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404731
| Blastp | - |
|---|---|
| Blastx | Bromodomain-containing protein 1 from Homo with 48.28% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001721) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455999.1) |
| Pfam | - |
| Rfam | - |
| GO | - |