| Id Trinity | TRINITY_DN50564_c5_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_404106 |
| Sequence | CTCCGATAAAACCCGCGGAACCTTCTCGAATCTCTTCCGGTTAGTTTTCGGTGGAATTGTGAAACCCCTTCAAGCTTTGGGGCAGTTATTGGGTCCAAAG AGAACAGCTTTGGTGTCTGGATCTTCATCGTCTTCGCCGCCATCGTCGTCGTCGTTTCTCGCTGTTGGGACTGGTGAAGATGGTGGTGAAATGGACCAGG GTGGGGTGACTCATCATTCTCCCACTCAGGTTTTGAAGAATTTCAATGAGATTCGGGTGCTTCGAATCGAACTCCCGAGTGGGGAATTAGGGATTGAGGA TGGGGTTTTGTTGAAATGGAGAGCTGATTTTGGTTCTACTTTGGATAATTGTGTAATTTTAGGTGCTTCTTCTGTTATTAACCCGAATGCTTCTGCAGAT TCTGCCAATGCCTTATGTGGTGTTGGTGGAAATAACAATGGTGGTGTTGGTGCTGATGATAATGGGAGTATACCGGATTCGTTTTACACTAATGGAGGTC TCAAACTTCGCGTTGTTTGGACCATAAGCTCGCTGATTGCGGCTTCAGCGCGACACTATTTGTTGCAACCAATAATTTCGGAGCATAAGACTTTGGAGAA TTTGGTTTTGACAGATGCTGATGGGCAAGGAGTGTTGCATATGAATAGGGATCAACTCGAGGAGCTGAGGGTGAAGCCGCTTTCGGCTTCTTTGGCATCA AAGAGGACTCTTGTCCCTGCCCTTAATATGAGGCTTTGGTATGCACCCCATTTGGAGTTGCCAGATGGAGTTGTTTTGAAAGGTGCTACACTTGTTGCCA TTAGGCCAAGTGAACAGTCACCTAAGAAGGAACCCTCTGATGTTTCATGGGTTTCAAATGTTTTCGAGGAGCCTTATAGAACTGCTGCTAGAATGCTTGT CAAGAGGAGGACTTATTGCCTTGAGATGAACTCCTTTTGAGTGATGCTTACTTGTTGGATCTAAAGGTAGTTCTTTTACTGTGTTGGTGCATAATTTGTT TTTATGGGTTGTAATTCAAGTCATTGTCGAATTGGATCGTGAAATGGGTTGATATTTGAATGTATAGAAAAGCTTGTAATGATGATGTTCATATGCTAGG CTAATGGATTGTTGCTGCATGACGATAACTGAAAATTGAGAGTTTTGTGGAAGTCTGTGTTTGCCTGCCAACTGTATTTTCATGATTGTCATTGTTCAAA TGTGTCTTGCTGTAGACATTTCTTCTGTTTTCGATGTAATTTTCTTGTATCTTTTTTCAAGAGCTCTTAATTGTTTTCACTTTAATTTTATGTTTAATTG CTTTATAGTGATAGCCTTGTTGACAATTGTGTATTATATTGTCTTGGTCTGCTAATTGTTTTAGATTTTAGAAGTTGTTGAATGAGCGAACGCGACTTGT GATTGAAGGTTGTATGGAATTACTTTTGCCTTATACCTCACTTCTCACTTGTCGGTTAGCATTTGCCGAGATTTGCTCAAATCCTGACAGGATCTGCCTA GAATTTTCATCACTATTCTTTAGTTCCTATGTTCTGATTGTTTCCTTATTTACCTCGTTAGACTCTTGTGGTCTTGCATTACTGTATTGTTCCTTTTGTG AAGGTTTACAGCTACAACTCTTATTTATTTGTTTGGAATTAAAATTTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178177; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404106
| Blastp | F-box protein At5g46170 from Arabidopsis with 78.15% of identity |
|---|---|
| Blastx | F-box protein At5g46170 from Arabidopsis with 77.48% of identity |
| Eggnog | NA(ENOG41119HQ) |
| Kegg | Link to kegg annotations (AT5G46170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419888.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |