Ll_transcript_402308

Id TrinityTRINITY_DN50568_c4_g4_i1
Name TranscriptLl_transcript_402308
SequenceTTTTAAGGGAGGCAGAGAAGCTGGTTGCAGTTAAGATTCATCCGATGACAATAATATCAGGTTCATTTCTTTGTTTACTGCTTTCATGAAGCAGATTTTG CTGTGTTTTAAATGCTGCTTACTTTCTGGTAACAATTTTATTGTCTCACATTCTGAGCATTAGTCAACTTACCTTAATAAGTAATTTCATGTAGTAAATG ATAAGCCTCCAGTTACGAGGGTATTTCAGAGAAGAAAGAAAGGTGACCAGGGTACTTTAGGAAAGAGAGGAAATGAGCATGTTGCACATGACTCTAACCA ACAAGACACTTGGCAAGATATGAATGGGTAGAAGATCATGGAATCAAGGAAGAGAGGGTAATATGAGGAGAAGGAATAGCATACTGTCAGGGGGAATCAT TTTAGGGAATTGTGGGGTGACTCTTGTCACAGGATAGAGAGAAATTATTCCTTTGGTCGTTCTATTGCACTTTCTGCATTCTTAACAGCTTTCTTATTTT CTTATTATACTCTTGCAATTATCCATGATAGCAATGTACAATTTCTGCACTGTTTAATACACAATTCTGCACTGGTTTATTTCTATTGTTGTTCTATTTT CTTTCTTAAATTGTTGGTATCTATCAAGTTGGTATCAGAGCTCCCGATCTTGGGAGCATCTGGATGGTATCAACACGAATGGAGAATAGGCTGGAAAATG TGGAGAAAAGGTTGGAGGGAATACAATCTTCTCTTCAAGAAACTTTAAGGCAACAAATGGAGATGCTGATGAAAACGGTGACAGATCGTTTGGAGGAGAC GGTAGGAGAAATAAGGGGACTAGGTAGAGAAGAAGCAGGGGAAAACAGTAATCGTGATGGGAGGCAATGGAGGGGTGGGGTATACGACAACGAAGAGAAC CGAAGAGAGGAGAGGGTGAAGAGAGTAGAAGTACCATATTTCACTGGAGAAGATCCCCATGGATGGGTTTATAGAGTGGAACGCTATTTCGAAATCAATC GCATTCCAGAGGAGGAGAAGGTAGACACTGCGGTGGTATGTTTGGAAGGGAAGGCTTTAAATTGGTATTAGTGGTGGGAATCCCGCATGATGGTAGCAGT GCAATGGCCATTATTCCGTCAAGCTTTGATGAGTAGATTTCAGGTGTCCTCGTCGGAGAATCCCTATGAAGCGTTGATGGGGTTGAAGCAAAGAGGAACA ATCATGGAGATTTACATGAGTTAATGGAGGTGGCACAAAAGGTAGAAGAAAGGAATCGGATCTTGGGGCGGTCATTGGGGTATTCAACCCGAGGAAGTGG AACCGGGTTCAATAAAATTGCCCTATCTGGACGCTGGACCGGGTCAAATGATTTTAAAAATTCATCTCATGAGGCACAATCACATGTGGGCCAAAAAGAA AACTCATGAGCCCAATGGGGACAAAATGAAAACACAGACACAAAGGGAGGAGTGGGTGCACGTGAAAGAGAAAATTTTAGCAACCATAAAAGGGGAGTAG GGTTCAAAAAAATAAGAAAGGAAGAAGAAAATGGGAAGAGAAGAAGAAATCTATGTTTCCGTTGTGACGAAAGTTATTTCCCAGGTCATATCTGCAGCAA CAAACATCTTCATATAATCCTACTTGCACATGGTGAAGAGAAAGAAGAAGAAGAAGAAGAAGGTGAACAAGGGGAGGAAATAGTAGATGAGTTGAATATG CAGCTGAACGTTAGTAGCATTGCTGGAATGACTTCAAAAAATTCACTCGAGCTATGGGGGACAATCAAGGGACGCAAGGTTATAGTAATGGTTGATTCCG GAGCATCCCACAACTTCCTATCACCCGGAATAGTTGAAGAATTGAAGATTGCCACTGAGAAGACGTCGGGTTACTTCGTGGAAGTGGGAAATGGACAGCG CCTAGGGAGTCAAGGGGTCTGTCGAGAGGTTGAACTTCAACTCCCTACACTGAAGATTATCCAGGACTTCTATCTGTTTGATTTGGTTGGTGTAGACGTC ATTTTGGGATATGAATGGTTGAAGAGTCTCGGTAAATTCAGCGCAGATTTGGGGCGTTATTTGCTAGAGATTCAGGATAATGGGAGGACCATTGAAATTA GGGGAGACCCAACTTTATCCAGAACAGTGGCCTCTGTAAAAGCCATAATGAAGGAGATGCGAAACGAAACAGAAGCTTATTATGTGGAGTTTGGAATGAT GAGTATGATGTGTTCATCGGAGCTTATTATTCCGGGTAGTGTGCAGCATCTTATCCAGGAATTTGGTGATATTTTTCATGAACCAACAGGATTGCCACCT CAAAGACCGTGTGATCATGCCATTATACTGAAGGATGGGGCAGAAATTCCACACATACGACCATATAGGCATCCTCATAGTTACAAGGAAGAAATTGAGA AATTTGTGAGGGAGATGTTAGCAGCAGGTATGATTCGGCCCAGTGTAAGTCCTTTCTCAAGCCCTTTGATCTTAGTAAAGAAGAAGGATGGAGGATGGCG GTTCTGTGTTGACTATAGAGCTCTCAATAAGGTCACTGTTCCCAACAAGTTTCCGATCCCCATAATTGAGGAGTTGTTGGATGAGATGGGCGAAGCTTCA TTTTCTCTAAATTGGATCTGAAATCCGGTTACTACTAGATTCGTATGAAGGAGGAAGACATTCCCAAAACCGCTTTTTGCACCCATGAAGGTCATTATGA GTATGTGGTGATGCCTTTTGGGCTCACCAATGCTCCCTCAACTTTTCAAGCGCTCATGAATGATGTTTTCAGGCCATATTTGAGGAAGTTTGTGTTAGTC TTCTTCGATGATATCTTGGTTTACAGTAACAACATTGTATCGCATTGTGATCATTTGCGGAAGGTGTTCGAAACGCTAAAGGAGCACAAGTTGTGGGTGA ACTACAAGAAGTGCTGTTTTGGGGCTATCCAATTAGAATATTTGGGACATCTCATTTCTGGAAAGGGAATTGAAGCTGATCCGGAAAAAATTGCAGCAAT GAAACAGTGGCCAATACCTAGAGATATTCGTGGGTTGAGAGGGTTCTTGGGTCTCACGGGGTATTATCGCCGGTTTGTCAAAGCTTATGGGATTATGGCT AAACCTTTGACACAACTCTTGAAGAAGAACAACTTCAAGTGGTCAACAGAAGCTCAATGTGCATTTGAAGAACTTAAGGCTGCCATGGAAAAATTACCCA CGTTAGCTCTACCCAATTTTAATGTGCCATTTGAGGTTGAGACAGATGCGTCCGGATTTGGCATTGGTGTTGTCCTTATGCAACAAGGCAGGCCGTTGGC ATTTGTGAGTCAAGCTTTGTCCGAGAGAGCAAGGATGAAATCGGTCTATGAACGTGAATTGATGGCTATTGTGTTTGCGGTGCAAAAGTGGCGACAATAC TTGTTGGGTCACCACTTTATTATCCGGACCGACCAAAAGAGTCTTAAGTTCTTATTGGATCAACTCGTGTTGGCGGGGGACCAACTAAAATGGGTTACCA AGTTGATGGGTTTTAATTTTGAAATCCAATACAAGCCTGGGTCAGAAAATAGAGTGGCGGATGCATTGTCACGTGTTATGGAGTACAAATTAATTTCTAT GGTCACCAATATTGATCTGGTTGAATTAGTGGATGAGGTTCTAGCTGATGATAAGTTGCTGCGGATTTTGCAAGAGGTTGTCCAGGACCCAAATTCTCAT CCAATGTACACTGTCTCTAAAGGCTGTTTGTGGTACAAAGGAAGACTGGTTTTGCCTAGCACCTCAACACGCATTCCAGTGTTGCTAGAGGAGTTTCATT CATCGCCTTGGGGAGGGCATTCAGGGGTAGTTCGTACTTATAAACGGATAGCCATGGCATTTCATTGGAAGGGAATGAGACGTGACATAGAAAAATTTGT AACTGGTTATGACAAAT BLAST
Tissuepods
Gene nameLI_gene_178223; 
Additional informationdetails; 

Expression of Ll_transcript_402308

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_402308

BlastpRetrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 44.59% of identity
BlastxTransposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 33.12% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_015964281.2)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;