| Id Trinity | TRINITY_DN50609_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_449414 |
| Sequence | CAAAATATTATTTTTTTACCATGTTTGTTCCATTTCTTCATCTTCCAAAACACACTCCATTTTTTCTCTCATCTTCTTTGCCCTAGATCCATGCCTTCCT GAGTTTCAATGCTACCCTTTTTCATTCTTTTTCTATGGACCTCTATATTCAACTTTCACAATCACAAGGTTCAGAGGATCTGGCTTTTGTGGTTGAGATG AATTATAGGGACTAGTGTTGCATCTTGACTTATTTTTTGTGTGACATTGGGGAAGAATAGTAGCTGAGTTTGGTAATTATGGGTACTGGAGAAGAGGATA CTAGGATGGAAGGTTATTGGATACGCAATTGAACGGGTGAATATTGTTCGTTTTTGTGGGAGGAGTTGGTGTGCATATAATGGGTGGCATGTGTTGCAAG GCCTCTGCCATTGAGGATAGCAGGGAGAGCCCGAGAGAACGATTAGCAAGCAAGGCTACATTGGAGTCATTTGTATCAAGGGGAACTTCATCAAGGAGGG AGGAAGTGTATCGAGTAAAGGATAGATATGATAACAGTGATGGGAGAGTTGCATTGATTGACAAGCAAGTGAGTAGCGGTGCTGTCCGAGTGCAAGGTGA TAATTTTGAAAGGAAGAGGGAGAAAATGGAATATGTTGTCGCTCAACATCCGGGGATTGGTAGTGTTCCCAAAGCCATTGAAGGGGAGCAGGTTGCAGCC GGATGGCCCTCATGGCTTGCAGCAGTGGCTGGAGAGGCTATCAGAGGATGGTTGCCTCGGCGTGCAGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGG GAACTTATAGTAATGTTTATAGGGCTCGCGATCTTGAACAAAAAAAGATTGTTGCTCTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCG CTTCATGGCAAGGGAAATTCACATTCTGCGTAGGCTCAATCATCCAAATGTCATAAAACTGGAAGGCCTGGTTACATCAAGGATGTCTTGCAGCTTATAC CTTGTTTTCGAGTACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACTTAAGTTTACAGAAGCTCAGGTTAAATGTTACATGCAGCAAATTT TACGTGGACTTGATCACTGCCATGCCTGTGGTGTGCTACACCGTGATATTAAGGGTTCTAATCTTTTGATTGATAACAATGGAACATTGAAGATTGCAGA CTTTGGTTTGGCAAGCTTTTATGATCCCAATCAAACTCAGCCACTAACAAGCCGGGTTGTCACTCTTTGGTATAGGCCGCCCGAGCTTTTACTTGGAGCT ACGTACTATGGCACTGCTGTAGATTTATGGAGTACGGGTTGCATACTCGCTGAACTGTACGCGGGCAAACCTATAATGCCTGGAAGAACTGAGGTGGAGC AGTTACATAAAATTTTTAAACTATGTGGTTCACCTTCTGAGGATTATTGGAAAAAATCGAAGTTGCCTCATGCAACAATATTTAAGCCTCAGCAGCCCTA TAGGCGTTGTGTTGCTGAAACGTTCAAGGACTTTCCTGCATCTGCAGTTGAACTGATAGAGACTCTTTTATGCATAGATCCTGCTGATCGTGGAACTGCA GCATTTGCCTTGAAGAGCGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCGAGCAAAGAATTTGATGCCAAAG TATGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAACAAGGGCCAGATGCATGACCTTGAGAGAAGAGGAGCAAGGGAGTCACGAGCTGTTCCTGC ACCTGATGCCAATGCTGAACTGGTCGTGTCAATGCAGAAGAGACAAGGGCTGAGTAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCACCCTGAAGAA GTTGCTTCTGGATTTCCCATCGATCCCCCTAGGCCATCACATGCTGTACAAGTAATTGTTGACCCTCAAGCACATCAACATAAAAGAGCCTCCCATTCAG GTCCACTGACTCACCGCGCTGCATGGGCTAAAGCTGGGAAGAACCAGGATGACGCTCCAAAGATTTCGATGGGGGGCGACTTATCAACAATGTCAGGCTT AATTGCATCGCGAAGGAGTGCGTTGTTTGATGATCGCAGAGAAAGGTCTGGATCGTCACAAGCCGAGGCTCCAAAACCAATAAGCAGGTTCCCTGGATCA TTCAAGGATGCCTCTGAGTCGTTGATGCAACAAGATCAGAAGCATCATGCACATGCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAACAAAAACACTATTC TTGTTGGTTATGGGTCGAAGGGGCATAAAATTCATTATTCTGGACCATTGCTAGTTCCATCAAGCAACATGGATCAGGTGTTGAAAGACCACGATCGCCA AATTCAGGAAGCAGTTAGAAGATCGCGGCTGGACAAGGCCAAAATGAGAAGACTTCAAGCTGAAGGGAATCAGATAACCAATTCATTATTTGTTTCTGGT CGTTGACACGTAGAGCTTGGCACAACAAAGCATCATTAGGAATATTTGATTCTTCCTCATTTTCCTTCTCTCTCTCTTCATTTTGCATGTACAACGAGCA AGTACCCGTCGCAAAATGCCGCACGGCCATGTTAGGTATAACTATCTATAGCTTAGAAATCTTCCCTTTCACTGAATGTATCACATGTATTTTCCCCTCA GCTGCAATTTCTCATATATGGCCATTCTTGTAAAAAAGCTTATCAGCCTTAAGCTGTAGAATATTGAGGGAACAAGTCTTCCTTATGTTAACTTATGATA TAGTAACTATCATTGGAAGATGGCTAAGTATGTCTATTCTTCTGTCCTTTACTTTTCCCATCTTTCCAACATGCATCATCATTGCTTCAACATCTTGGTA CCGATATACAAGTTTTTTCCTAGCAACTTCTGTTGTTGCTGTTAGGGACCGATACATTTTATGGTCCCGGATCGAGATAGTTGTGAGATTAACACTCGAG CTTGGGTGGTAGAAAGAGGGAATGTCCCTTATCTTAGGAAGATGCATATTATATAACACATAGTTTAGCCTAATACGTTTTCTTCAAAGCCCTTAATATA GGGATGATGCATGAGGAAAATACATGTACATTTTTACCTTAATATAGGGTACCTAGTATGTACATTCTTACCTTAATATAGGGTACCTAGTATGTACATT CTTACCTTAATATAGGGTACCTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178531; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449414
| Blastp | Probable serine/threonine-protein kinase At1g09600 from Arabidopsis with 55.7% of identity |
|---|---|
| Blastx | Probable serine/threonine-protein kinase At1g09600 from Arabidopsis with 55.7% of identity |
| Eggnog | Cyclin-Dependent Kinase(ENOG410XPIR) |
| Kegg | Link to kegg annotations (AT1G09600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425429.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |