Ll_transcript_449417

• Id Trinity: TRINITY_DN50609_c0_g1_i7
• Name Transcript: Ll_transcript_449417
• Sequence: CAGAATCTATTTTTTTACCATGTTACTTCAATTTCTTCATCTTCTAAAACACACTCCATCTTCCTCTCTAACCACTTTGCCCTAGATCCATGCCTTCCTG AGTTTCAATGATACCCTTTTTTACTATTTCTTCTGGGTTATGGAAACACCTTCAGGAGCTATATATTCAAGGCCCATGTATTGGAATCTCACTTTCACTA TCATAAGGTTCTTAGGATCTGACTTTTGTGAATTGTAGCCGAGTTTGGTGGTTACGGGTACTGAAGAAAAAGATACTAGGATGGAGGGATATTGGATATG CAATTGAAGAGGTGAATATTGAGATTGGAGGTTGCTTTTTGTGGGAGGAGTTGGTGTGCTTATATAATGGGTGGCATGTGTTGCAAGCCATCTGCTATTG AGGATAGTAAGGAGAGCCCGAGGGAACGTTTATCAAGCAAGGCTGTGTTGGAGTCTCGTGTATCTAGGGGGACTTCGTCAAGTAGGGAGGAAGTTTATCG AGTAAAGGATAGATATGATAATAATGATGTGAGAGTTGCGTTGATTGACAAGCAAGTGAGTAATGGTGCTATTCGAGTGCAAGTTGATAATTTCGAAAGG AAGAGGGAGAAAATGGAATATGTTATTGCTCCGCATCCAGGGATTGGAAGTGTTCCCAAAGCCATGGAAGGGGAGCAGGTTGCAGCTGGATGGCCCTCAT GGCTGGCAGCAGTTGCCGGAGAGGCTATCAAGGGATGGTTGCCTCGGCGTGCAGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAA TGTTTACAGGGCTCGTGATCTTGAACAGAAAAAGATCGTTGCTCTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGGTTCATGGCAAGG GAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTTGAAGGCCTAGTTACATCAAGGATGTCTTGCAGCTTATACCTTGTTTTCGAGT ACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACTTAAGTTTACAGAAGCTCAGGTTAAATGTTACATGCAGCAAATTTTACGTGGACTTGA TCACTGCCATGCCTGTGGTGTGCTACACCGTGATATTAAGGGTTCTAATCTTTTGATTGATAACAATGGAACATTGAAGATTGCAGACTTTGGTTTGGCA AGCTTTTATGATCCCAATCAAACTCAGCCACTAACAAGCCGGGTTGTCACTCTTTGGTATAGGCCGCCCGAGCTTTTACTTGGAGCTACGTACTATGGCA CTGCTGTAGATTTATGGAGTACGGGTTGCATACTCGCTGAACTGTACGCGGGCAAACCTATAATGCCTGGAAGAACTGAGGTGGAGCAGTTACATAAAAT TTTTAAACTATGTGGTTCACCTTCTGAGGATTATTGGAAAAAATCGAAGTTGCCTCATGCAACAATATTTAAGCCTCAGCAGCCCTATAGGCGTTGTGTT GCTGAAACGTTCAAGGACTTTCCTGCATCTGCAGTTGAACTGATAGAGACTCTTTTATGCATAGATCCTGCTGATCGTGGAACTGCAGCATTTGCCTTGA AGAGCGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCGAGCAAAGAATTTGATGCCAAAGTATGGGATGAAGA AGCTAGAAGACAAGGAGCAGCAGGAAACAAGGGCCAGATGCATGACCTTGAGAGAAGAGGAGCAAGGGAGTCACGAGCTGTTCCTGCACCTGATGCCAAT GCTGAACTGGTCGTGTCAATGCAGAAGAGACAAGGGCTGAGTAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCACCCTGAAGAAGTTGCTTCTGGAT TTCCCATCGATCCCCCTAGGCCATCACATGCTGTACAAGTAATTGTTGACCCTCAAGCACATCAACATAAAAGAGCCTCCCATTCAGGTCCACTGACTCA CCGCGCTGCATGGGCTAAAGCTGGGAAGAACCAGGATGACGCTCCAAAGATTTCGATGGGGGGCGACTTATCAACAATGTCAGGCTTAATTGCATCGCGA AGGAGTGCGTTGTTTGATGATCGCAGAGAAAGGTCTGGATCGTCACAAGCCGAGGCTCCAAAACCAATAAGCAGGTTCCCTGGATCATTCAAGGATGCCT CTGAGTCGTTGATGCAACAAGATCAGAAGCATCATGCACATGCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAACAAAAACACTATTCTTGTTGGTTATGG GTCGAAGGGGCATAAAATTCATTATTCTGGACCATTGCTAGTTCCATCAAGCAACATGGATCAGGTGTTGAAAGACCACGATCGCCAAATTCAGGAAGCA GTTAGAAGATCGCGGCTGGACAAGGCCAAAATGAGAAGACTTCAAGCTGAAGGGAATCAGATAACCAATTCATTATTTGTTTCTGGTCGTTGACACGTAG AGCTTGGCACAACAAAGCATCATTAGGAATATTTGATTCTTCCTCATTTTCCTTCTCTCTCTCTTCATTTTGCATGTACAACGAGCAAGTACCCGTCGCA AAATGCCGCACGGCCATGTTAGGTATAACTATCTATAGCTTAGAAATCTTCCCTTTCACTGAATGTATCACATGTATTTTCCCCTCAGCTGCAATTTCTC ATATATGGCCATTCTTGTAAAAAAGCTTATCAGCCTTAAGCTGTAGAATATTGAGGGAACAAGTCTTCCTTATGTTAACTTATGATATAGTAACTATCAT TGGAAGATGGCTAAGTATGTCTATTCTTCTGTCCTTTACTTTTCCCATCTTTCCAACATGCATCATCATTGCTTCAACATCTTGGTACCGATATACAAGT TTTTTCCTAGCAACTTCTGTTGTTGCTGTTAGGGACCGATACATTTTATGGTCCCGGATCGAGATAGTTGTGAGATTAACACTCGAGCTTGGGTGGTAGA AAGAGGGAATGTCCCTTATCTTAGGAAGATGCATATTATATAACACATAGTTTAGCCTAATACGTTTTCTTCAAAGCCCTTAATATAGGGATGATGCATG AGGAAAATACATGTACATTTTTACCTTAATATAGGGTACCTAGTATGTACATTCTTACCTTAATATAGGGTACCTAGTATGTACATTCTTACCTTAATAT AGGGTACCTAG
• Tissue: pods
• Gene name: LI_gene_178531;
• Additional information: details;

Expression of Ll_transcript_449417

FPKM

• PAB: 5.8
• PNAB: 11.1
• PS1: 10.7
• PS2: 5.4
• PS3: 9.1
• PW1: 6.8
• PW2: 4.5
• PW3: 5.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449417

• Blastp: Probable serine/threonine-protein kinase At1g09600 from Arabidopsis with 54.91% of identity
• Blastx: Probable serine/threonine-protein kinase At1g09600 from Arabidopsis with 54.91% of identity
• Eggnog: Cyclin-Dependent Kinase(ENOG410XPIR)
• Kegg: Link to kegg annotations (AT1G09600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425429.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;