| Id Trinity | TRINITY_DN50646_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_448925 |
| Sequence | AAACAACACAGAGAGAGAGAGGGAAAGTAGAAAGAAAACCACCTCCACCCACTTACTCTGCCCGCCAAACAAACCCTCTCACCCGAAACCAAGAAATGTC ACAACAACCATCGCTTCCTCCGCCGCCGCCGCCGCAACCTCAACCTCCTCCTCCTCCCTCCGACAACGTCCGCGTCCGTTGCGCCGGCTGCAGAATGATC CTCACCGTAGCTCCCGGCCTCACCGAATTCGCGTGCCCTACCTGCCGAATGCCGCAGATGCTCCCCCCTGAGCTCATGGCTAGGGTTCAACACCACGCCA CGCCACCGAATCTTCCTCATCCTCAAACGACGTCGCATCCTCCTCCTCCTCTCCTTCCTCATCATCCGTCTTCTGCTTCGTCATCGTCGTCGTCTCACGT GCCGGCTCACGGTATCGATCCGACTAAGATCCAGCTTCCCTGTGCTAAGTGCAAAGCTATCCTCAATGTACCTCATGGACTCGCGCGATTCTCTTGTCCT CAATGTGGAATTGAACTCGCCGTCGATGTTTCCAAGGTCAAGCAATTCTTCGCTCCTGAAGAAGTCAACGAGGTAGCTGTTGAAGTAGAGCGGGAGGAAG ATGAAGGTGGCTTGGTTGGAGAAACATTTACAGATTATCGACCACCAAAAGTCTCTATTGGACCTCCACACCCAGATCCTGTCGTGGAGACATCTTCCCT GTCTGCAGTGCAGCCGCCAGAGCCTACTTATGATCCAAAAACTAAAGATATTTTGGAAAGTACAAAAGCTTTGTCATGCTTGCAAATTGAGACGTTGGTC TATGCTTGTCAGAGGCACCTTCAACACCTCCCCAATGGTGCTAGGGCTGGATTTTTTATTGGAGATGGAGCTGGTGTGGGTAAAGGTCGAACAATTGCTG GGTTAATTTGGGAGAACTGGCACCATGGACGCAAAAAAGCATTGTGGATTTCTATTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTGGATGATGT GGGTGCAACATGCATTGAAGTATCTTTTTCCCCCTTTATCCAGTGCATGCTTTGAACAAACTGCCTTATGGTAAGCTTGATTCAAAGTCTATTGGGGTCA GGGAAGGAGTTGTTTTCATGACATACAACAGCCTCATAGCATCTTCTGAGAAAGGTCGTTCTCGTCTCCAACAACTTGTGCAGTGGTGTGGAGCAGGGTT TGATGGTCTTGTAGTTTTTGATGAGTGTCACAAAGCAAAAAATTTGGTCCCTGAATCTGGTAGCCAGCCAACACGAACTGGAGAAGCAGTGCTTGATATC CAGGATCGACTACCTGAAGCGCGTGTTGTTTATTGTTCAGCAACTGGTGCATCCGAACCTCGCAATATGGGTTATATGGTTCGACTTGGCCTTTGGGGAG CTGGGACTTCTTTCTCTGAATTCCGTGAATTTTTAGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGG GATGTATTTATGCCGGACGCTTAGCTACAAGGGTGCCGAATTTGAAGTTATTGAAGCACCATTAGAAGATGAAATGATGGACATGTATAAAAAGGCAGCA GAATTTTGGGCTGAATTGCGAGTAGAATTGCTGTCAGCCAGTGCCTTCTTAAATGAGAAACCTAATTCTAGTCAACTATGGCGACTATACTGGGCAAGCC ATCAGCGTTTCTTTGGACACATGTGTATGTCTGCTAAAGTCCCTGCTGCTGTGAGACTAACAAAGAAAGCATTAATCGAAGATAAGTGTGTAGTCATTGG TCTTCAGAGTACTGGAGAAGCAAGGACAGAGGAAGCTGTGACAAAATATGGTTCTGAACTTGATGATTTTGTTTCCGGACCTCGAGAATTGCTGCTCAAG TTTGTGGAAGAAAATTACCCATTACCAGAAAAACCCGAACTTCTCCCAGGAGAGGATGGTGTAAAGGAGCTCCAAAGGAAGAGACACTCGGCCAATCCTG ATGTTTCAGTTAAAGGAAGGGTCAGAAAAGTTGCGAAGCTGCAACCTCCTAGTGATGTTGAAAGTGATGAAGAATCTGAAACTGACTCTGCTATTGAATC TACTGACTCTGATGACGAGTTTCAGATATGTGAAATTTGCACTACTGAGGAGGAAAGGAAAAAATTGCTTAAGTGTTCCTGTTGTGGTAAATTAGTCCAT TCAGCATGCTTAATGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATATCTTATAGCAAGACAAG CTTACATAGATGAACTCCAGAAGAGGTATGATGCAGCCTTGGAGCGCAAAACAAAAATATTAGAGATCATTCGTTCTTTGGATCTTCCAAATAATCCTTT GGATGATATTATTGACCAGGTAGGAGGACCTGATAAAGTTTCAGAAATGACAGGAAGGAGAGGCATGCTTGTGAGGGCCACTAATGGGAAGGGTGTAACT TATCAGGCTCGTAATACAAAGGATGTCACTATGGAAATGGTTAACATGCACGAAAAACAGCTCTTTATGGATGGTAAAAAGTTAGTTGCCATTATCTCTG AAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGAAGGGCCAAAAATCAGAAAAGAAGGGTTCATTTAACTCTAGAACTACCATGGAGTGCAGACCG AGCAATTCAGCAGTTTGGAAGAACTCACCGATCAAATCAAGCTTCAGCACCAGAATACAGGTTACTCTTTACTAATCTCGGTGGAGAACGACGGTTTGCA TCAATTGTTGCTAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCTTTAAGTGCTTATAATTATGATAGTGCTTATG GAAAGAGGGCTTTGATGATTATGTACAAAGGAATAATGGAGCAGGACTCTCTGCCTGTTGTACCTCCAGGTTGTTTGTCAGACAAACCAGATACTATTCA AGATTTTATTATTCAGGCAAAAGCTGCTCTTGTATCTGTTGGAATAGTTAGGGACACAATTCTTGGTAATGGTAAAGATCTTGGAAGGTTATCTGGTCGT ATTATCGATTCTGATATGCACGATGTTGGACGATTCCTTAACCGGCTTTTGGGACTACCTCCTGAGATTCAGAATAGGCTATTTGAGTTATTTGTAAGTG TCTTGGATCTTCTCGTTCAGAATGCTCGCATTGAAGGTAACCTTGACGCAGGCATAGTTGACTTGAAAGCTAATGTCATTGAACTACAAGGGACTCCCAA GACGGTTCATGTGGATCAAATGACAGGGGCTTCAACGGTTTTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCAGCAAGCACCATGCTGAAT GAAAAACAGAAGGATGGACTTGGTTCATCCAATGATGGCTTCTATGAGTCCAAGAGAGAGTGGATGGGAAAACGTCATGTCATTTTAGCATTTGAAAGTT CTGATTCAGGCATGTATAAGATAGTCCGCCCCCCTGTTGGAGAATCAATCCGGGAGATGCCTCTGTCTGAACTAAAAACTAAATATAGAAAAGTTTCATC ATTAGAGAAGGCTCAAACTGGTTGGGAAGAGGAATATGAAATTTCATCTAAACAGTGCATGCATGGTCCCAAGTGTAAGATTGGCAACTTCTGCACAGTT GGCAGAAGACTACAGGAAGTAAATGTCTTGGGCGGCCTCATTCTTCCTGTTTGGGGAGCTATAGAAAAGGCCCTTGCTAAGCAGGCCCGCCTAAGCCATA GAAGGCTGCGTGTTGTACGCATTGAAACTACTACTGTGGATAATCAGCGTATCGTTGGGCTTCTTGTGCCAAATGCTGCAGTTGAAACTGTGCTTCAAGG TTTAGCATGGGTTCAAGAAATTGATGATTGACCTGTGACTATGGACTCTTCTCACACTTCTTTTTTATCAAACTTTACACCTAGGTGCTGCCTTCTGAAA TTTGCATCCCTGGTTCTGAAGCAATTTTCTGTTATAGGGAGAAGGCTCAACCCTGGTCCTGAATTTTTGGAGGGGAAGGACTCATCCTATGCACCATGCA ACACAATTATGCACTCTCGGTTTTAGCGATTTTTTATTTTATCACCCATTTTGGCGTATAATTCGTTCGATTTTGTATATCTGTAAAGATGATTATTCAC TGAGAAAGTGAAATACGGTAGATGGCTAGGTTGTATTGCATGTAGTCCAGTCTGAACCAGAACTAGTTTGTATCAGTTATCATAAATGATTATTGAAAAA TATATTGTTCAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_178828; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448925
| Blastp | Protein FORGETTER 1 from Arabidopsis with 80.55% of identity |
|---|---|
| Blastx | Protein FORGETTER 1 from Arabidopsis with 80.33% of identity |
| Eggnog | Strawberry notch homolog(ENOG410XQ7Q) |
| Kegg | Link to kegg annotations (AT1G79350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432321.1) |
| Pfam | P-loop containing NTP hydrolase pore-1 (PF13872.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |