Id Trinity | TRINITY_DN50669_c1_g3_i5 |
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Name Transcript | Ll_transcript_450198 |
Sequence | GAATTTGAACCTCTTAATTCTTATATTTAGATAGATGAGTAATGTTATAATGGTTCTTCTATTTATGTTTTCACTTTTTGATTGCTGATAAAAATTTGCA TTGAAGCTCTCTGAAATCACAACTTGAATTTGAACCTCTTAATTCTTATATTTAGATAGATGAGTAATGTTATATATATGGTCTGGATTAAAAGTTAGAT TAGGATCACAGTGAATTTTCAAGTCACTTGACTTTATGATTTAGGGTGCATTTGAAGAAGCTTATAGAGTTATCTCATCCTAAACACACTCACACACTTA AACATGTTTTTGGAAAAGCATATGACAAAAGCTTATAACATTCATTTAAACTCTTCTTATTTGACTTCAGTAAGCTTGTTAGAGAAGGTTATGAAATAAA TCGAGTTTACAAGAAGGTCATAAACTCCTATGTCATGAGTGATTAATTAAGCCAATTACATAAATGTGCTATTTATCTTGACTATACATGCATGATAAAA TGGTTGTAATCTGTTCCTCTCACTTGCAATTATCATCTCCTCTCATTTGATATGCTCCTTATATATATATATATATATATATCTATCTTGTATATCTTAT TCTGAACTCTCTCTTTTTTGTGTATTTGCAGCTGCAGTGGCGTCAAATTCATTTCTAGCTGACAAATCTGCGAAGGTTTTCGTTGCTGGTCACCGGGGTC TGGTCGGCTCGGCCATCGTTGAAAAGCTGAAACAACATGGGTTCACGAATCTAATCTTACGTTCTCATGCTGAGCTTGATCTTACTCGCCAAGCTGATGT CGAAGCCTTTTTTGCCTCAGAAAAGCCAGAGTATGTCATAGTAGCTGCAGCCAAAGTTGGTGGCATCCATGCCAACAACACCTACCCTGCTGATTTCATT GGCATCAACCTCCAAATTCAGACCAACATCATCGATTCTGCTTATCGCACTGGCACCAAGAAGCTCTTGTTTTTGGGTTCCTCTTGCATATACCCCAAGT TTGCGCCTCAGCCGATCCCGGAAGATGCTTTGCTTACTGGTAGCTTAGAGCCCACAAATGAATGGTATGCAATTGCCAAGATTGCCGGGATCAAAATGTG TCAAGCTTACAGAATTCAATACAAGTGGGACGCAATCTCAGGAATGCCGACAAACCTATATGGACCAAACGACAATTTCCATCCCGAGAATTCTCATGTT TTACCTGCATTGATGAGAAGGTTTCATGAGGCAAAGGTGAAAGGTCTCAAGGAGGTGGTGGTATGGGGTACAGGGAGTCCACTGAGGGAGTTTTTGCATG TTGACGATCTCGCGGATGCGGTCGTGTTTATGATGGAGAATTACAGTGGACTTGAGCATTTGAATGTTGGGAGTGGGAAGGAGGTTACTATTAAGGAGTT GGCTGAGTTGGTGAAGGAAGTGGTGGGATTTGAAGGGGATCTTGTTTGGGATACAACTAAGCCTGATGGAACTCCAAGAAAACTTATGGATAGTTCAAAA CTTGCAGGGTTGGGTTGGACACCAAAAATATCACTCAAGGATGGTCTTGTTGATACCTACAAATGGTACTCAGAGAATGCTAAGCAATGATTCTTCTGGT TTAGCAGAATGTGTCATATGAAATCTATAGGCTCTTATCATTTCACTATGACCAAAATTCTATAAAATAACTATCCAGAGAAGACAGTATATGAACATTT TTTGTGTGGAATGAGGACTTTATTGCTATTTGGGTTTTCTCTTGAGATCAAGAGAATCAAATACTATTATTTATCAGAAACTCTGAACAAAAACTTGTCA TGTGGTTATCATTTTCATTGTATTCCATTTCCAGAAAGTACATTCTCTTTAAATACTGATTTGAGCGTCGGGTTCCATGTAGTTAGCATCACACAAATCT TGCAATTTCAATCGTGATTCGATGCAGAATCTATGGCCGGCAATGCAGATCGGAAGCAGAATCGTTTTAGAGTTGTGTTGTATCGCATGAATGAGCCCGA ATCCTGCCATTCAGACGGCGGCGTCCGTGGCGCTGCTTATGATATCTTTGGGGCAATCAAAACCTGCCAAATTTTGGATTATACTTATGGTGGGAGTTAG TAATTAAAAAAATGTGGCAATCCAAATGTGTTGCATCTTTTGTGTGTGACACTAAGCATATCTTATTTTTACTATATTGAAAGAACACTAAGCATTGATA TCTTTTTTCGTTTATGACCAGTACCGTCTATTTGTTATTAATTCCATTTATTTTTAAGTAAATAAGTAAAAAAGTTTTCCACCCTAAGTAATTTATGGGT GTTGAATAGTCTAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_178986; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450198
Blastp | Putative GDP-L-fucose synthase 2 from Arabidopsis with 84.15% of identity |
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Blastx | Putative GDP-L-fucose synthase 2 from Arabidopsis with 82.19% of identity |
Eggnog | Nad-dependent epimerase dehydratase(COG0451) |
Kegg | Link to kegg annotations (AT1G17890) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461254.1) |
Pfam | NAD dependent epimerase/dehydratase family (PF01370.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |