Ll_transcript_449832

• Id Trinity: TRINITY_DN50682_c2_g1_i24
• Name Transcript: Ll_transcript_449832
• Sequence: GGAAAATGGAAAGTAGATGTAATAATAATAAAAATAGATAAAACCTCTTCATTTCTATTCTATTTAAAATATGAATGATACATAAGGAATGGAATATTTA TTAGTGAGAGAGAAAAGTGAATGATAAAGCTGGTTCGGTGTTGCTGAGCTGCCAAAACCCAATCTCTGTATTCATCAATCATTATCGTTTCATTTCTCTG TTAGCTTTTTCTTCAACCAGGTGTTGTTCCTATCTTCTCTTTTGCGTTTTACGTTTCATTTTTCTTGTTAATTCGACATGGATTTACTATTTCTTCATCA GATCGCTGTGCCTTTTGTTGATCCCGTTAATCATACTCGATAAGAGACACACAGTTATTTTCTTATCGAACAAGATCAATTTAAAATAGGGCAGGTGATA TAGTTCTCTGAGGTTTAGAAAGAACAAGATAGGTTTATTATTGTTGTTATTATTATAATGGAACAAACTCTTCTAAAATGAGAAAGTAAGGATTTATCCA CCGTTCAATACTCTGTGATTTCTTAGCCTTATTGAATCAGAATCTGATCAGGGTTTCAAATCCCTCTTCTTTTACCATAGTTGCCTGTGACTCTGTTTTA TGCTATCCACTCCAAATATCTCTTTGCCATTTCTGGCGATCTGCTAGTCTATGCCCTTGAAGGTCTGTGTTGTGCTCTTCGCAGGTGGTTAACTTCCTCC TCGCGATCTATGCTGCTCCTCTGTTATCCGTTCCAATTTTAATTTTCTTTTATGTGTTCTGATCTGATTTAGAAAGACTTAGAAATCAATATTTTGCCAA TTAACATGATTTATAATAGAGAATTATGGCGCTGATTGATCCATGTAGTCGACCTTAGGACTTCTGACTTCAAAACATTCCCCCTTTTTGGTTGTGTGTT GCGAGTTATGCCTTTGAAGTCTGAACTTGTCCCTATGTTCTCTCCGTTTCAATTAAGGCTTGAAGCTACTTATGTTCCTTAGCATATTTTTTGTTATTTA TCTTGAGTGTCTTTAATTTTTCATAGAAAAAACATCTTTGGTCATTTATGTGTGGGTAGTGTAAAATTATTTATACTGTATCCCTAATCTTCGGTATAGC AACGATGTCAATATCCACTATACTGATATATCAGCTTCGAGTTGGCCGCTCTGGGGCTGACTATCTTGTGTGCATTGAGATATAAATTTACTAAAATTTA ATAGTGGACATACCTTTATTCACTTCCGAGACATACTCATTTTAGACGAGCCTTATCCTCCTACTGTTGTTGTTATTGTTGTTATTATTGTTATTATCTG CTTGTTCCTCCATAAGTTGTAGATGTCTTTTCTTTGATAAGTTGGTAGTATCTTTCTTGTAGGACCATGATTAAGTTGTTTAAAGTAAAGGAAAAGCAGA GAGAACTTGCAGAAAATGCAAGTGCTGGAGCGCCAGTTAAGAAGCAAAGTGCTGGAGAGTTGCGCCTTCACAAAGATATAAGTGAGCTGAATCTTCCAAA ATCTTGTGCCATACAATTCCCCAATGGGAAAGATGACCTGATGAACTTCGAAGTTACAATTCGACCCGATGATGGATATTACTTAGGTGGCAAATTTTTG TTTTCCTTCAATGTGTCTCCTATCTATCCACATGAGGCACCAAAGGTTAAGTGCAAGACAAAGATCTACCATCCAAATATTGATTTAGAAGGAAATGTTT GTCTTAACATCTTGCGAGAAGATTGGAAACCTGTCCTCAATATAAACACTGTCATTTATGGCTTGTATCATCTTTTCACGGAACCAAATTATGAGGATCC TCTGAATCATGATGCTGCTGCTGTGTTAAGAGACAGCCCTAAGTTGTTTGAATCAAATGTAAGGAGGGCTATGGCTGGTGGGTACGTGGGACAAACCTTT TTCCCACGATGTATGTGAAACCTTTCTCTCTGCCTTCAAGTCCCTGTTCAAATATATCATCAAAGCTTGAAGACCCCCATCTTGGTTTGTAAAATAATTA AATATTGCACTTTCATCACTGTTATTTGTCATGGAGGTGGGATCTTATTTGTAAGTTCGGTGCTTCATTGAATGTTGACTTGGTATTCTAAAGCGGACTA GGGAGAAAACGGGTTTAGTCCTGAATATTAGCATTTACGTTTTGTCTCCGTTTAATTTTGTGTTGATTTGCATACATTCATCATCAGTCCAAGTTGAGAA CCCAAGAAGATGAAACCTTATAGGTAGGTAAAGATAGAGATAATATTAATTATTTCTTTATCAAGTAGCAGAGTAAAGTAGAGAAATGAATGGATTAAGA TACAATAGGAAAAATAGTAGCAGATTTGCTGAAATAAAAAAAACCCAGAGATTTCCTT
• Tissue: pods
• Gene name: LI_gene_179089;
• Additional information: details;

Expression of Ll_transcript_449832

FPKM

• PAB: 3.3
• PNAB: 2.6
• PS1: 0
• PS2: 0
• PS3: 1.1
• PW1: 0
• PW2: 1.7
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449832

• Blastp: NEDD8-conjugating enzyme Ubc12 from Arabidopsis with 85.87% of identity
• Blastx: NEDD8-conjugating enzyme Ubc12 from Arabidopsis with 85.87% of identity
• Eggnog: ubiquitin-conjugating enzyme(ENOG410XS81)
• Kegg: Link to kegg annotations (AT4G36800)
• CantataDB: Link to cantataDB annotations (CNT0002643)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444746.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;