| Id Trinity | TRINITY_DN50703_c0_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_377145 |
| Sequence | AGCAAATAAAGTATAGTTATGTTTATCACATTCTCACACCGCCCCTACGAAAACCTAAATCCTTCTTATTCTTCACTGCTTCCGTAAATCAAAACCATAT TATCTCTCTGAAGCTTCGCGAATCTCTGTGTAAGACTCTCTATTCTCATAAACCCTACCTCTCTCTTTCTCCTTCCACTCGCGCTTTCGCTCTACGGGTT TCACTCTTCAATATATTTTCACCCTTTCCAAATAGATTATCATGTCTGGGGAAATTGCTTTCGATGGACAAGATGCAGGGTATGTGCCGGAGAACGTTGA TTTTCCGCAAAACGATTCTGATGAACATGATGAAGGAAATGTGATTGATGATGAATCTGGGTTTCCTCAACAGCTTGATGAACATGATGCTGGAATCTTA CCTGAGGAGGAAACCAATCCTCCTGAAAATGAATTTGATGGTCATGGTGTTGAAGATTTGCCTGGAAACTCTGATACTCTTCCACAAGAGCATATTGTAA CTGAGGAAGAACATCATGATGGAGGAGACATGACCGAGAATTTTACTTCTCAAGAAGTGCCAGAACCTGAGGGCGATTCAAAACCGACTGAAATAAAAAG ATGGCCGGGGTGGCCTGGAGAGAATGTTTTCAGAATGCTGGTTCCTGCGCAAAAGGTTGGCAGCATTATTGGCCGCAAGGGAGAGTTTATCAAGAAAATC ACCGAAGAGACTAAAGCTCGAATTAAGATTCTCGATGGTCCACCAGGAACCACCGAAAGAGCAGTGAGTTTACTGTTCAATTTCTTGTCATTTATAAGTG AGAATATTGTGGATATATATACACTGTTTATTGAGGCATATTTTCCATATTTCTGTTCATATACTGATCCCTGTGCTTATTTGGATGCATTATCTGTTTT TAGATTTAAGTTTTGCCGTGTCTTCTCACCCCTTGCAGTTAGGCTTCTATCTTTTTTGTTGAGTTCATTAGTTTATTGATTATACTTGCAATCATGTCTT AGGAGGTGTCTTTGTTCATTCATTTTGAACTTCATAAGAACTTAATATGGTTGGGATGCTGAGAGATCGGTGCTTTCTTTTTTGTCTGAAGATTTCTTAT CCTCTCATAATTTTCTCCCTTCTCTAATAATATTCCTGTTATAAAAAAATCAATGACAGAGCCACACTGTAAAAGTTAGCTGTTGTAGTTGTAGAGGCCA AGGCCTTATAAACCCCAAACTAGATTCCCATACTTCTAGTGTGAGTCTCAAGTCCCATAACGTGTAATTCAATCCTAACATCCCACCATGCTCTGCAGCT TTGCCACCCATGTGGTTGCAGACTGGTTATGCACTAGCCCTTTCTTTGACTAGTCCTGAGTGAACAATGTGCAATGCTGGTTTCACCATCTCCCCACTTT TTTTCAGCCAAGAGACATGATGGAAAGTTTGATAACAATTGATAAGAACCTTGGGAAAACCACATCACAAACATAGCTTTTGTAGTTGGAGAGCCCAAGT CCATATAAACCCCACACGGGAATCCTATACTTCCAGCATGGGACACAATTCCCGCACCTTGCAATTGGATTCTAACACAAACTACACAACAATGCAAATA TAACATCCTTACGGGTTATTTCAATCTATTTGAACTATCACCATCGTTATTAATAAAATTCGATGCTATAAATTTTGGTAACTACTTGGTGCTTAAAAAT GGAAAACTTATACTTGATTAAACAAACTTCTTATATAATTAATTTGGAATTGAAACTTACTGATTTATTCATGATAAAATATGTTAACACATGAATACTG TTGCTAAGGAATTAAATGAAGAAAAACAAATTGTCAAGGAAGTGAAACTATAAAAATATCTGTAAATCAAGTAGCAGAATACATAAGTGATAAATAATCA AACAGGTTAAATATATAAATAACAGAAATGTCTTTTGTCACGATAACCAAATGGGTGTGTGCAGGTTGTCAGCAAATATGAATGACCAAAGTGACCTCAA ACTGAAGAGCTAAAGTTCAAGTTGCAGGGAAACAACAACAAGCTTATACAACTGCTGAAATGTTTTTGTCTTAAGAATCAGGACTAGTTTTGCAGACTTT GGTGGCAAGAAGCCTTCATTGTACCTGGTTATGGTTTCTGCGAAAGAAGAGCCAGATCGCACCATACCACCTGCTGTGGAAGGTTTGTTAAGGGTTCATA AACAAGTTGTCAATGTCGACCAAGATCCCGCAGACAGTGCATCAGGTGCTGGACGTCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCTGGAAG TTTGATTGGGAAGCAGGGGTCCACTATAAAATCCTTCCAGGATGCTTCTGGTTGCAATATACGTGTTCTTGGATCAGTAGAACACTTGCCAGTTTTTGCT CTGCGAGATGACAGTGTTGTGGAAATACAAGGGGAGTCTGCTGGGGTTCACAAGGGAGTTGAACTTATTGCACTTCATCTACGTAAGTTCTTGGTCGACC GCAGTATAGTTGGAGTTTTTGAAGCAAAGATGCAAAGGCCGGATGTTCGAGCTAACCAGAATGTGCCTCCACACCAACCACACCACCAACCTTGGGGTCC TCCTCCTCCTCAAGGGTTTCCGGCTACTGGAGGTGGTGGTGGACCTGCTTTTGCACCCAATCCTCAACTTATGCCACCTCCACATAACTATGATAACTAT TACCCACCTGCTGACCTGCCTCCTATGGATAAGCACCTTCATCAGGGTCCACCACCTGCCTACGCAAGGGATCCTTCTATGGGAATTCATTCATCCACTG CACCACCACAACAATCTGTTGCGACTAAGGTCACACAGCACATGCAAATTCCTCTATCCTTTGCAGATGCTGTTATTGGAGCATCAGGTTCAAATATCAG CTACATCCGTCGTGCTAGTGGGGCAAGTATTACAATTCAGGAGACCAGAGGTGTGCCAGGGGAGATGACTGTTGAGATAAATGGTACTGCATCACAAATA CAGGCGGCCCAACAGCTGGTGCAGAATTTCATGGCTGAAGCTGCAAGTGCTGCATCACAGCAGGAACATATGGGGGGATCAATAAACCAAGGTTACAATG CCTATCCGACGAATGCTCCTGTTTATCAATCTCCACCTTCAAATGCTAGTGGTCATACAAGCCATGCTCCTTCTGCAGACTATGGTTCTGTATATGGCAC CAATTATGGCTATTAACAAGATTACAATCAATTTTCATTGAGGAGCCTTACGTTTTGTAAACATTTAAGTTCAATTCTAGTTCTTGTTGTCGTGTCTTAT ATCCCTTATATTTAAGCTGTTTTGCATTTGATACAATGACTGGATAGGATTTAGAGGACATAACAAGTTTCAAACCCAAAAAAAAGATATGATAATTTGG TAGTTTTTATGGTTGGTTTTGTTTGTGTTTTCAAGTCCTTTTTAATTTGGTTTTGAAGGGGAAGGTGGTTGAATATATTAAGCATGACGTCTTACGTTTG ATCCTAGATCTCTGTATGAAAAAATAGTGTAAAACTTTCCATTTTATGTCTTTAATGGGTGGAGAAATTGAGTAAAAAATATTTTAATTCTTATTTGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179254; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377145
| Blastp | Flowering locus K homology domain from Arabidopsis with 54.12% of identity |
|---|---|
| Blastx | Flowering locus K homology domain from Arabidopsis with 56.97% of identity |
| Eggnog | mRNA transport(ENOG410XNN8) |
| Kegg | Link to kegg annotations (AT3G04610) |
| CantataDB | Link to cantataDB annotations (CNT0002411) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441915.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |