Ll_transcript_378146

• Id Trinity: TRINITY_DN50755_c1_g1_i2
• Name Transcript: Ll_transcript_378146
• Sequence: CAAAAAAATGTTAAAACATTATTTTAGTAATATCTATAACATTTTTATTTATAAAAGTATTAACTTACAATAATACATTTATTAAATTATAATAAAAAAG TGGATTACTTGTTGCACTTGCATCGGTGTATCCTCTTCTTCCATTCGGTGTTAGGTTTTCACACACACAATTGGAATTGAGATTCTTCCATAGCCATATT CTCTATTCTCTCACTCTCGAAATCTCAAGGATTCGGAACTTCAGCGCGATAAGGTAACGCTACTTTCCTTTCTATCTCTTTTTATTATTACTTTTCCAGA TTTGCTTTTAATTATTTCTCTTAAATTTTCAAGATGAATGTTATGGAACTTGTAGGACTGATTTGAAACAAATATGATTTCGAATTATGCTTTCTATTTT TCATTTTTTTATATTTGAAGAGGAGAGTTTGTAAACAAGAAAATCAAAATCCGAAGACCTAACCGACTTGTTAAATGCTTGTATTGATCACTTTATTATG CAAATTTTGATTTCCCGATTCAACTGGTTTAGAAATGTTATCATAATTAGGTTCTAGGTGTGGTTTATTTCCTCGATATGGTGAGTTTGGTGTAACTGTA AGGTTGTTGCTTAGTAACCATGAAGTCACGAGTTAACTGGAAATAGCATATCCTGGTGGATAAGGCTGTATATATTTACCATCCCACTAAATGGGAGCAT CGTGCATTGTGCTGCACTTTATTTTGTGTTTTGTTTCCTCACTACATCTATGATGTGTTTATTGTCTCTCGAAATTGATGCTCCTTGAATTTCAAGGTGC TTATGTTTTGAACATCATATGGTGTTATACTATATATAATTTGTTCATTTTGTGTACTTGAACCAGATTATGTACTGATCTATATGTATGTGCCAAACGA ATAAACACTGTTGTGCTTTTATCTATTCATTTAGTACCCGAACATTCCGTTTTCTGAAATTAATCCAAGTGTTGAAGATAACTTAAGTGAAAATAAATAT ACTAAGAAAGCACATTGGGAATAGAAAAGATCTGTAGGATGAACTCTAGAAACTCACACAACACTAAATGTTTTAGGAATTTAGGCTAAACTGAGGCATC TTTGTTGATTCTTTTATTTCTTAGTATCAAGACAAACCATTATTCCAGAGTAATGTTCAAGTTTCTTTTCATGAAACTTCAAGCGTAGTTCTTTATTTCT TTCCCTTAACTTCAGTTCCAGACTAACCTTTCTTCTCTTTTCTTTTTTGGGTTTTTTTATTTTTGATGACTTTTTTTTTAAGGTTATTTTTGCTGTATGG ATATCTCCACTTTTTATAATGCATTTAATAAGTATGTTATTTCAAACTCTGCCATAAGCTGACCTCATTTAGTGGGAAAAGGCTTTTACTGTTATTTTAG AATTTGCCTTGTTGTGCCACATTGATGGTTGCTATCTCACGTGTGGTGCTTTGGTGACTCTTTTGGGGCTTGTCTTCAGTGATTGCTGATGATATACACT ATACACCATTAACATACTAAAAAACTTTTAATTCATTATTGTGATTTTTGACCATTTTGAATAACAGCAAGGAGTAGCAAATGTTTGATTTTGACACATT ACAAGAGCCCAAGTCTTAAATATTTCACCCTGTCTAAATCATATAAGTAATGTAAAAGGTATTTTAAGTTTAAAACCCATTCAGACTGCCACCTTTTTTT TCACACAGCCTAATTTTCTCCTCTCTAGAAAAGCTGTTTCCGTTTCTTGGATTATTTTGAAGGTATCCAAATTGTAAGGGGTAACAGCAGCCAAACTATG AGATAATAATTTCAGTTAGCCAATTAATAATGCCAAGATTGCTAGTTTTAAATGCTCCTCTCCATTACAAATGTTTTCTTGCAGGAGTTATCCAAGCAGC GGCAATGTCTTCCTCTTATCTCCCTGCTACAACAGAGTCAATTGCTCTGGCATTGGAGGCCAAAGACCCATCTGAGGCCATCTCTATTCTTTATCGTGTA CTTGATGATCCTTCTTCTTCACCTGAAGCTCTGCGTATGAAAGAGCAGGCCATCACAAACCTCAGTGACCTTCTCAGGCAGGAGAATAGAGGGGAGGATC TGTGCAGCTTGCTCACTCAGTTGAGGCCCTTCTTCTCCTTGATCCCCAAGGCAAAAACTGCTAAGATAGTTAGGGTAGTAATTGACTCAGTTGCTAAAAT TCCAGGGACATCTGATCTACAAATTGCACTTTGCAAGGAAATGGTACAATGGACCCGTGCTGAAAAGCGTACATTTCTAAGGCAACGAGTTGAGGCAAGG CTTGCCGCGCTTCTGATGGAAAGTAAGGAGTATTCAGAAGCTTTATCTCTTCTTTCTGGCTTGGTCAAAGAGGTTAGAAGATTAGATGACAAGCTTCTCC TTGTCGACATAGACTTGCTGGAAAGCAAACTACACTTCTCATTAAGAAACCTTCCAAAATCAAAAGCTGCACTCACAGCTGCAAGAACTGCTGCAAATGC TATTTATGTTCCACCTGGTCAACAAGGTGCCATCGATCTGCAGAGTGGAATACTTCATGCTGAGGAGAAGGATTATAAAACTGCATATAGTTATTTCTTT GAAGCTTTTGAGTCTTTCAATGCTCTTGAAGACCCCAAGGCAGTTTTTAGCCTAAAATACATGCTGTTGTGTAAGATCATGGTGAATCAAGCAGATGATG TTGGTGGAATTATTTCTTCCAAAGCCGGACTGCAATATGTTGGGCCTGACTTGGATGCTATGAAAGCTGTCGCTGATGCTCATTCTAAGCGATCCCTGAA GCTATTTGAAGTTGCTTTGCGAGACTACAAGGCCCAATTGGAGGAAGACCCAATTGTCCACAGGCACTTGTCATCATTGTATGATACCCTCATGGAGCAG AATCTTTGCAGACTGATTGAACCATTCTCAAGGGTTGAGATTTCGCACGTTGCTGAGCTTATTGAGCTTCCCTTCGATCATGTGGAGCGGAAGTTGTCTC AGATGATTTTGGATAAGAAGTTTGCAGGCACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGACGATCCCAAGACTGATGCGATATATCCTGCTAC TTTAGAAACCATTTCCAATGTTGGGAAAGTCGTGGACAGTCTTTATGTTAGGTCTGCCAAGATAATGGCATGAGCTCCCATTGACACTCCATTTCCAGAA CATTTGTTGCTATTTACTTCGTTATGATGACTTGCATATCTTGTTTTGCTTCTTGAATTTGCTAAACTCAAAATCGTGGTAACCTTCTTTCAGTGACTGT TTGATCTTTAACAACTTGGCCGGGAAGGAATGTTTATCAGAATCTCTACGCATTTGTTCACGGGTAGTCTATGTGAATGGAGCTAGATTTAGAATCTCAT GCTACAAAGATTGCATTAATTTGACGATTCTGTTTGGAGTTTATTTTGTTAGTTAATACTGTGAGAAATGTCCTGAGGGAAGTTATTGTCATTTTTCAAT AGGGAGGAACTTGCAAGAATAACAATTGCATGTTGTTAGAGTTGGAGATCTCAAATTAGAAAATGTGAATGAACTTCATTGGAAGAACTTCTGCTCCTTT AATATAGCCTTCAATTCCATGTGTTTCACATTATATTTTTTTTGGTATATCGGAAAACAAAACAAACATTAAAATCTTAG
• Tissue: pods
• Gene name: LI_gene_179643;
• Additional information: details;

Expression of Ll_transcript_378146

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.3
• PS3: 0.3
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378146

• Blastp: 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 87.71% of identity
• Blastx: 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 87.71% of identity
• Eggnog: cop9 signalosome complex subunit(COG5159)
• Kegg: Link to kegg annotations (AT1G29150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417640.1)
• Pfam: PCI domain (PF01399.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;