| Id Trinity | TRINITY_DN50773_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_379120 |
| Sequence | ATAATTTTAATTTCATCACTCTTCTCTTTAAATGAACACAATTAATTTGAGTTACTCCTTCTCCACCCTACACTTAATTATAATTATTACTTTCATGACA AAAGTACTGAAGGTAAATATTTCACGCTATATAGAGCTAGTGACCACTTAAGAGTTCAAGGTCCTTCCTTAGAAAAAACTAAGTATCATTCATTCATTGG CATTCCCTTTTTCCTCTCACAAATGGGTCGCCATTCCTCTTCTGTGAAGCAAAAATTGAGGAAAGGTTTATGGTCCCCTGATGAAGATGAGAAGCTTTTC AATTATATAACAAGATTTGGTGTTGGATGCTGGAGTTCTGTTCCTAAACTTGCTGGTAAGTGGTAACTAACTATTTATACCATGTTTTTCACTTGTTGTT GTATGTTTCTTACTAAACAAGGAGAAGAGTGTAACTAGTTTCATGAGTTGCAGGACTTCAAAGATGTGGAAAGAGTTGCAGGTTGAGATGGATAAATTAT TTGAGGCCTGATTTAAAGAGAGGAATGTTCTCACAACAGGAGGAGGATCTTATAATCACTCTTCATGAAGTCCTTGGAAATAGGTGGGCTCAAATTGCAG CACAACTACCGGGAAGAACGGATAATGAGATAAAAAATTTCTGGAATTCATGTTTGAAGAAGAAACTATTGAAGCAAGGGATGGACCCAACAACACACAA GCCTCTCAATGAAGGTAATGTAAAAGAAGAGAAAACTAGCACAGAATCACCACCACAAATGCAAATACCAATTTCTACAAGCCCTTCAGCTACAACAACC TTATTATTTTCATCACAATGTTCACCACTTAGAATAAGCAACTCGAATTACTATGATGATGGAAGGTTAGCAGAAGAAGCATCAAGAGAAATTTTCATGA GCAAGCAAGTATTAGACCCTTTATCTTACTATGATAATTTCCAAATGAGTGTTGCACAAAACTCTTGTTATGGTTTACCTGTGAGTAGTAATTATCAAAC AAGCATTAGAACATTGTTTGATCAGAACCAGTTTGGAACAAATTCAAGCTATGGATTCTCTTCAATGCCAAGTCTAACCAATTCAGATCATGTGTCTGTG ACAGAGTTTTCTTCAGATAACAACTCAGGTTCTAAAATCAGTTCATTATTCATGAATGATAATAATAATAACAATAATCAGGTGAAAGAAAATTCCAGCA ATAATAGCTCAAACATGAGCATTTATAATGCAGGAGGAGGAGGAGGGTTTCATCAAATGATGGAAAATGCTTCAGGGTTCTCTTGGGATGCTGAGAACAA ATTAGACAATTCTTTTCAGTTCAATGCTATAAAGTCAGAAGATTTCAAGACATGTAATTCATGGGAAGAAGGACAACAAAATTTGCAGACTCATGTTTCA ATAGATTTCAGTTGCTATCCGTTAACATCACTGTCAGAAGATCTAACAGGAACAAGTTTTGATATATTCCAGCAACTATGATACAATGATATATATGAAC TGTAAATTCTTTAATCTTTTTGGGTTTTGTTTGTTTTGATTATGTGAATTGTTTCCCTTGTTGAAAATTGGTAGCAAAGATAGAAACATGTTGATATTAC AGGAAATTGTTAGTATAAGATTTGAGTTGAGTGATGATACCCCCTCCCCAATTTTTTTTCCTATTGATTGATGTATTTGTTTTCATCAGCCAAAGTTTGA AACTTTGAATAAAGATATATTCTTGAAGATTAATGATTGAAGCTAAATATGTTTTGTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_179789; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379120
| Blastp | Myb-related protein Hv33 from Hordeum with 76.67% of identity |
|---|---|
| Blastx | Transcription factor MYB86 from Arabidopsis with 83.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000269) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463924.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |