Ll_transcript_378341

Id TrinityTRINITY_DN50787_c1_g1_i6
Name TranscriptLl_transcript_378341
SequenceTTGATAACTGCCAGATAGGGCAGTAGCAGGCACCCTATCAGTTTCAGCCTCTACCCCAATATTAGTTACTTAATATAAAAATAATCTATTATTATTAATT ACTATTACCAATAAATTTGTTAATACCAATAATATTATTATTTTTTGTGTGCAAAATAGCAGATATGATTCATGTTTTGTTGAAATACTGAAAAGGGGAA GATATGATTCATGTTTTTTTGGTTGATAACTGGAAATGAAGTTTTGCTCTCTCTTCTTCCAAAAATCATAACTTTTGCACACTCTCTTTTCAATTTGGAA TTTGAAGATTACCCTTTTTCTTCTCTCATTTTCCTCTTTCATTTTCATATTGTATTTGTTCTTTCATCCACCAACAACAACACCACCCTCTCTTTTTCTC ACTCATCTTTTCTCTTTCTCTCTTTGTTTTTATTCACTCAGGTTTTGAAAAACAACCTTGAATCCAATCAAAAAAGCATACATAACAGCATATTTGTGGT TCTTATTCTCTCACTTGTTGTTTCTTTGATTTTTTTTATTCTGATAGATCGGTTTTGTTTCATTACCGGCGTCTGCTAAACTCGGTGCATGCTCTGCAGC TTTATTCAGTAATATTTAATTCTATCGGGTTAGGAAACTTATAGATTCCCTCAATGCAAGAGCAGAGAAGTACAATTGGTTCCTTGCCTGAAACCATAGA ATTTGATTATGGATCTACATCGAGTAACACTACAGTTAATCCGCCAATTTGCTTGAATAATATGCAGAATCCTGCAGAAAATCGCATACCTGATTATTTA CTTTCCCCCGCCCCCAGTGAGATTAACCCATCTTATGTGAATTATGTAAACCGGGACTGGCAGAACATAAATGGATGGAGGAGCTCAGGTGAGCCAAGTT CCAATAATACACAAAAAGAGGTTAACAACAATGAGCAGAAAAGAGAACTGGGATGCTTATCTTCAGTAAGTGCTAATGCTATAGGTGGTCCAATACTAGA GAGGCGCTTTAGACCAGCCAATGCTCTTTCGCTGGAGAATGTCATTACAAGTTCTATGCCTATGCACAGCTCCAATTCACATTTGGTGTCCCAGAGTCTT AATTTAAATGCAAGCTTAGCAGATAACGGCAGTAATAATAGTCATCATGCGGAACATCCTAACTTGTCCAAGTCTAGTGGACCAATAAATGAGCATATTC CACCTATTACTAGTTCTGGTTCTTTTATGCTTCCTTCTGGATGTAATGGCTTTTTGATTGAGGATAGTGATGGTAGGCCAGGTTGTTCACAAGACACTCG CCGTGTATCTCGTAAAAGAAAGGCTGTTGAACGAGACTCTGGACAATCTTCAGATGTTGGAAGTTGTAGCTACAGCCAGAATAGAGATGGTAGTGCTTGG AGTACACTTCCTACTCAGAATTATGCCGGGAGCAGTTTTAGAAGAACTGCTTCAGCAGAACAGGTAAATGCAAGACTTGGCCTGAGTATGGGTAATGTTA CCTCTGAAAGTGTTCTGGATACAAATGTTGCAGGAAGATCAGAAAGCTTCCTCAGAAATTGTCGTTTGCGGATAAATCCCTCAAGCCAACAAAATTCCAT TCCTCCCGCTGCATTCCCAAGTGGGAGAGTGATTAGGAGTAATGGCGTTTCTTCGTCCACTTCAACATTGCAAAGGATTCATCCTGTTGATAATTCTCTA GACTTGAGGTCAGTACCACCAGTTGATACTACGATTCCTCAAAGCCAGCCCCTTCGAGTTCATGTTCCTGCTTTACCAAGGAATGCACAATCATTTAGGT GGAGTGTCGGATCTAGCTCAACAAACAACCATTCATCAAACTCGGTTATAAGTGCAACTAGGGATAATCTACCACAACAGGAAGCTAGCTCAAGAAGTAT GGCTAGAAACATTTTAGAACAATCGATATTTTTACCCCCAACCAATTTAAGAAATTTGGTTCGAAATCCCGCAATTAGAGCTTCGAGTAGTGCAAATTTA AGTATCCCGGGAAATGTTACTTCATCCCAGCCTGGGTCAAATTCCGCTATCAATCCACCATCTGTCTCACCATGGGTTTCTCAGCCTAATCCTCAACAGC ATTATCCACGCAGGTTAGCTGAATATGTTCAGCGGCCCATGTTTTCTCCTGGTTCCGAGGCTGCTGGAAATCCGATCAGCAATTATTCTTCCTTGCGTAG TCCAGCTATTTCATCTGGGTTGTCATCGGGGGTGGTACATCTGGGGTCCTCTTCAGTATTGGAGAGGCCAGGTGATAGTGAATATGCAATTGCTCCTTCA TTGCGATCATTGCCTGGTGCAGGAAGTGGTAGAATTGTATCTGAGCTCCGCGATGTGTTGGGCCGCATGCGTAGGGGTAGGAACCTACGGCTTGAGGTCA GTTGTTTTTCCTTCAAATGAACGATGTATATTCACTTCAGTAAAGCATTTGTGGCATATTTCTCTCAAATTTATTAACAATGCCATTTGGGTGTTCAAGA CCTGTCTTGTCACCGTCCCAACCTGAAGTGAACTAAATGCCTTCAGATTTTCAAAATTAGACTCGATTTTTTTTCTCATCGAATTCAGGTTACAATTCAA GGTGCCCAACCCTTCCCCATCTCACAAATTTCTTTAAAAAATACAATTGTTTTTTACAATTAAGCTTAACTAATAAATTTAAATTAATTACCTTTCCCAT AATTCTATAATTTAGATATACTGATATACATAATGTTCAAATTTGTACAATATGTCAATATTGGGTGAGGTCAGTTCCAACCCGGTCATTTTCGGGTCTG CTTCATGTCCAAACAAATGGTCCAATCAAAATGACACGAGTTTGGGCCATGCTAAACCCTCCTATCACATCCCACGAACACCCCTAAGCGTCAATGTGGC TTCAATCTGGCAATTCTGATTCTGTTTTGATGCAATTATGCAAAATATATTTTCACTTGTCCGTTGTGTTTAGCAGTAAGTTTTAAATTGCAAAGTTGTC CATGACAAGCTCCAACTTCTTTTTACCAAACTCTCTAGCGATACATAACTACGTATAAAAGTAATTAGCCTCTGATATGTTTTTATTTTATTTCTAAGCC TATCATGACAATGTTTCATAACTATTAAGATGAAGTCCTGTCTCCAAATAGTTTAAAAATGAAAAAGAAAAAAATGAACATACTCTAAACATTTCATCTG CATTCTCTTTCCTTTTGGTTTCTTTTGTCGGTCTGAAAGATTAGTATTACATTGGTTTTTTGACAATATTTTAAACCCATTCTTATATGGTAATTAGAAG AGGGTGAGCCATGGCACAACGGTAAGGTTGTTTGCCTTGTGGCCTGGAGGTCATGAGTTCATATCTT BLAST
Tissuepods
Gene nameLI_gene_179931; 
Additional informationdetails; 

Expression of Ll_transcript_378341

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_378341
BlastpProbable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 30.43% of identity
BlastxProbable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 28.07% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT5G42940)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019436945.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;