| Id Trinity | TRINITY_DN50788_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_379165 |
| Sequence | CTGGAATCTCTATATAATCCTCATAACAATCTTTTTGATACCAATAAATTTCATAACTCATAACTATTACACCTCTCTTACATTCTAAAGCTGTCCATTT AGATTCCATGCAGAATAATAATATTGAATATGATCTATTTACCAATTTGCCAAATGAAATCCTGGGCCACATAGTTTCTTTTCTGCCTAATGAATCTTCT CTAGAAACCATCCTCCTTTCTACTAGGTGGAGAGACCTTTGGAATAAGGCTATAGTTAGATATGGAACTGCAGAGGATATCATTGCTGTTCTTGCTACAT TTCTGACACATTTTGATGTGCTTGATCCATTAAAGCATCCTAGAAAGCTTCAATTTCACTTTGATGAAGATACTGTAGTTTTGGCAACTATTGCAAATAA TGGTAAGCTTCTTATAGATTTCTCTCCTTGGAAGAAAGTGACTCAAATTCAGTATGAACTTCAGTTCAAGCTCAATAAGGAGCACATAATTTACCTATCT TTTCCCTCAACTTTCTTAGTCACTACTCTATATTTGAAATCAGTGAACTATTTGACAAGTGATGTAGCTTCTTCTATTGTTTCAAACATGGAGCATCTTG AGAAATTGGTGATCATTGAGTGCAGTGGATTGCAATCTTTGAGTATTGATTCTAAATCAAAGCTTCATAGTCTAACAATCATAGATAACTTGCAATTGAA GTCTCTCTATCTTACAACTTCTAAACTAAAATATTTTCGATTTCGTGGACCGCTTTGTTGGATTTGGCCTGAGTATCATTTCAACCTAAGTGAGGCCATG CTTGATTTCAGACTTGGTCCAAACTGCAGTAACTTCAAGACTACAGATTTTGATGCAACTCTGTTAACAATAAAGAATTCTGAAGTTCTCAGCCTTTGTG AATGGACTTTTGAGGCATTAATATGGCCTTCAATTTCTTCTTTATCTGGGAGGTTCAAATTTTATAAATTAAAAGAGCTATGGTGGATTGATAGTTATAA GAATGAACACAACATTGATGCATTGATCACCTTCTTGACATTATGCCCTTCCTTGGAACAACTTTTTCTGACAATTGATCCTAAAAGTTACATTGCCAAA AGGTCAAATTCATGCTTCATGCATGCAACAGAATGTACAAAACTACAGCATCTGAAAGTGATTCATTTTATGGAGTGAGTGAAATTTCATTGGCTAAAAA AATAATTCAGCTAGTAAAGGAAAAGCCTTTGGAGATAAAGATATCAGATGGAAGTTATTTGGATCCTTTGTTTATGCATTGATTTTTAGATATCAATCAC ATCAAACTAGGCCTTTATGTTAAGTACCAAAAAGGTTAAATTAAATGATAGAAACAAGTGGTTCCCGGGTATGATGATACAAAAAGATAACTTATCTCGT CGTGTCAGTAAAAGTACGACATTTATATTATTTTGTTTAATTTTATAAATGTTTTTATAGAAAATAATAAAACAAAACACATGTGATGATTTCATTTGCA AGAGCATATAACATATCCCTTATACCATATATACTTTATTATCTGAAAATAAAAATATAAGTTAAGTTGCAGTTATTCGGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179939; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379165
| Blastp | F-box protein At2g39490 from Arabidopsis with 42.54% of identity |
|---|---|
| Blastx | F-box protein At2g39490 from Arabidopsis with 42.54% of identity |
| Eggnog | F-box protein(ENOG4111ACM) |
| Kegg | Link to kegg annotations (AT2G39490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_006603026.2) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |