Ll_transcript_376997

• Id Trinity: TRINITY_DN50792_c6_g2_i6
• Name Transcript: Ll_transcript_376997
• Sequence: GTTAAAGCAGACATATATAGTTATATTTATATATATGTAAACCTATAACAAAAAAAGTCAAATAGGTAGATATTCAAATTTATAATTTATATTCATAATC TAGTCCAATAAATTCACGTAAACAAACATCCTTGAATTTTTAACAAGTTCAAAATCTACAATTCACAACATATATCAATCTAAAAAAGCACAGAAGATAA TGAAATATGCACGAATGGAATGAAAGGAGAATGTGTTAAAATAGGTGTGGGAGGCATGATATGATATTTAAAATGAAAAGAGGCAAATGTGTTTATGGAC TTTAGAGCAGATGAAGGCCCAAGGCGTGTGTGAGTTGTATATTATAGATTATTATTATTATTATTATTGATTTTGATTGCAGTAGTGAAGTGAGGTTGGG ATGTCGGAAAGAGGTGTTGAAGTTCGATGCCAGAGAATTGGGTGCGATGCTTTCTTCTCCGAACACGATAATCCCGATGCTTCCTGTCAATATCATCCTT CCGGACCTATATTTCATGACGGGATGAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCCTCTTCTTACAAATTCCAGGATGTAAGACAGG GAAGCATACATCAGAGAAGCAAGTAATTGCACCCGTTAAGAAGAATACTGTGCCTGCTCCAGCTGCAGCTTCTTTAACCAATGCATCATCAACGGATTCT TGTTCTAGGTGTCGGCAGGGTTTCTTCTGCTCAGACCATGGCTCACAAGGCAAATTGGTAGAAAAACCTGTAAATGTTGCTGGAGATGCCACTTCTGAAA ACAAAATCTTTGTGGCTCCTAAACCTCCAAAGAAGATAGTTGATATAAATGAGCCTCAAATATGCAGAAATCAAGGATGCGGCCAAACTTTTAAGGAAAA GGATAATCATGACACTGCATGCAGCTACCATCCTGGTCCTGCAGTCTTTCATGACCGGATGAAAGGGTGGAAGTGCTGTGACATTCATGTAAAGGAATTT GATGAGTTCATCACTATTCCTCCATGTACAAAGGGATGGCATAATGCGGATCCAGGGTCCTGATCTATGGAGACATCAAAGGATGAGTTGTTTTGTTGCA GGCACTGTTGCTGTAATTGAAAAGGAGAGTCATTAATTAGAACAAAATCACCCCCACCCCATCTCTCACTTAGTCAACCTCTATTGTTAACTTGGTTGAG TTCATAAGAATCCACTCCATGAGAATGATTACTGTAATAGTCTAATCCTGGAAGTTGTAGGAATATGGTTTTGTTGTCATGTGTTCCTTGAATAACAGGA TGTTTTTCTGAATGACCAGTTTGGATCTGTCTAATCCTTAAATATCTCTGAAAATGGTTTTTGTGCCTCTAGTTTTATTATCATATACAAGTATTACTTA TAGAGTAAAA
• Tissue: pods
• Gene name: LI_gene_180000;
• Additional information: details;

Expression of Ll_transcript_376997

FPKM

• PAB: 1.4
• PNAB: 8
• PS1: 4.7
• PS2: 3.8
• PS3: 4.9
• PW1: 11.7
• PW2: 28.6
• PW3: 12.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_376997

• Blastp: Cysteine and histidine-rich domain-containing protein RAR1 from Arabidopsis with 66.36% of identity
• Blastx: Cysteine and histidine-rich domain-containing protein RAR1 from Arabidopsis with 65.02% of identity
• Eggnog: cysteine and histidine-rich domain (CHORD) containing 1(ENOG410XPV6)
• Kegg: Link to kegg annotations (AT5G51700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426573.1)
• Pfam: CHORD (PF04968.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;