| Id Trinity | TRINITY_DN50838_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_514900 |
| Sequence | TTCTTCTTTAATATCAATCACGAGACACGGTTCTTCATTTCATTCTATCCGCAATGGGAAGACCATCCTCCACCGTTGAAATTCCTCGCCAATCGCACCG CCAAAACGATCGTCGCTCCCGAAGCCCTAGCTATGATTCATACGATCGAAACCTTGACCGCCGCACCGACCGCCGCCGCCGCCGAAGCCCTAGCTATGAT TCATACGATCGAAACCGTCACCGCCACACCGACCGTCGCCGCCGCAGCCCTAGCTATGACACATATGATCAAAACCGAGATCGTTATACTGATCGAAGCC GTAACCGCCTTCGATCTCAATCGCCTGAATACAGAACAAACCCTGAGCAAACCAACGGGATTTCAAATAACAAGGATCTGCCGAATAAATTCGGCCGTGG AAACGGTGCGTATTTAGACCGTGACTATGGTGATAGGAGGCGCTCTGATTCGGAGTCCGACGAGGAGTTGAAGGGTTTGAATTTTGAGGAATACAGAAGG CTGAAGAGGCAGAAGATGAGGAAGGCGCTGAAGCACTGTATCTGGAACGTAACGCCAAGTCCTCCGAGGCGAGATAATGATGATTGGGAAGATAATAAAG CTGAAGAAATTTCAGAGAAGTTTGGAGATGATAGTGCTGTGAAAAGCGATTCCAGCGATAAGGAAATCAAACCCAAAGGAAAATCTAAATCCGAGAAATA TGCGAAGTCCGAATCTGAGAGTTCTTCTGAATCTGACTCCGATGATTCGCCTTCGAAGAAGAAGGGCAGAAAGAGTTCAAGTTCGAAACGGAAGAGTAAG AAATCGTATAGCGAGAGTGACTCGGAGGAGAGTGAATCGGAGGAGAGTGAGTCTGATGAAAAATATAGTAGAAGAAGAAAAAGTAGGAGGAAGGGTAGCT CTAGTAAGAGGAGAAGGACTAAGAGGAACAAAAAGAAGAGAAGGTATAGTGATTCGGACGAGAGTGAAGAGAGCGAAATTGATGGCTCCGATGCTAGTGG AAGAAGTAAGAGGAAGCGTTCTTCTAAGTCTCAATCAAAAAACAGTAGAAGAAAAAGGAGAAGGTCTGAAACTGAAAGCGAGAGTTCTGAGCCTGAGGAG GAGAAGGGTTTGAGTGATGTAGTTGTTGCTGATGAGGTGAAGAGGACAGAGGTTGACGTTGAAGCTCTGGAACTGAAGGAGTTGTTTGAGTTACAGAAGA AACCTGTTTTGGATAATGACCTACCAGTTGGGCCAATGCCATTGCCTAGAGCCGAGGGGCATATTAGTTATGGTGGAGCCCTTAGGCCTGGTGAAGGTGA TGCCATTGCGCAGTATGTTCAACAAGGGAAGCGTATTCCTCGTAGAGGAGAAGTGGGTCTCTCTGCTGAGGAGATTCAGAAGTTTGAGAGCCTTGGTTAT GTGATGAGTGGTAGCAGACACCAAAGGATGAATGCTATTCGTATTAGGAAAGAAAACCAGGTTTATAGTGCAGAGGACAAACGTGCTTTGGCTATGTTTA ACTATGAAGAGAAGGCCAAGAGGGAGCATAAGGTTATGGCTGATCTGCAGCGGCTTGTGCAGCGTCACATTGGCCAGGATGTTGGTCCAACTCATGATCC TTTTGCCGCAACAAAACCATCTGACACTGCTGATGCCTGATTTCATGTATCTTTCTGCTTTTGTTCTTTCCCCTTGTTTGTACTTATAGATTGCATTTTA AGTTTTGCATGTTATATGTGTTAGGCTTGGAGAATGTAGACATTTTAATGGTTTGAATTATTATGGAATGACTGTGTTGGCAGATTTTTCGGAAGCATGT GAATTTAATTATGGCAACAGCTTTCTATGCTGCCAATAATTTTGGTTGCTCCTCTTTGCTTTAAGAATTTGTTGGAAGGAATGTGTTCGTGCTTGTTGAA TCCAACTTCAAATTGTTAGTTTTATAATATGAAGCTAATTGCTTTATATGGCAATTAGTTTATCTCCCTTTGGATTGGATTAAAAAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_180365; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514900
| Blastp | NKAP-like protein from Mus with 64.36% of identity |
|---|---|
| Blastx | NKAP family protein from Dictyostelium with 60.5% of identity |
| Eggnog | Ras-induced vulval development antagonist(ENOG410ZJFH) |
| Kegg | Link to kegg annotations (66707) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441858.1) |
| Pfam | Ras-induced vulval development antagonist (PF06047.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |