Ll_transcript_516489

Id TrinityTRINITY_DN50857_c0_g2_i17
Name TranscriptLl_transcript_516489
SequenceGAAAAGAAAAGTGAAACCTTTTCTCTCTCTCTTGAAAAATCTGACAGGATCGTACTCATACACACTCTTAAAATAATTGCAGTTTGTGTTCTCATTGATT GGAAGCTGTAAGAGAGAGAGAAAGAGAAAGGGGTAAAAGCAACAGTAGTAGTAGACTAGTAGAAGAAGAACATAGCATAGCGTGGCCACTAAGTAGTTAA GTATCAACCATAACACCATAAACTACAACAACAACTAGAACAAAGTACATACAATACCATAGCTACTGCAAAAATTTCATCTTTTTCCAACCCCATTTCT TATCTTTTCTGGGTTTTTCTGCATTCTTTGAGATCCCTTCTCTTCTGGCTGTTCATTCATTGCTCCTTCAGATCTGTTTGCTTTTCAAGTTTATTCCTTT ATTTAGCTTACTGAAAAGCAGAAGCTGCATATCTTTTGTTACTTGGTGTTGTTGGGTTCTGAAAGAATAGATATTGTAGCATGAAGTGTTCAGTTCAAAA TTGGAACTTGGGGTGTTGGGGGTTAAGTGGAGTAAAAGCTAATGAGGCATAAAGCTATTGTCTTATGTAGTGATACTGGTTTTGGTTGAGAATTGAAGGG TGGGTATTGTTTAGATTTGAAGGTTTTTTTTTGGTGAATGGGATTAGGGGACATATAACAAGGATTATATTCTTCTGTTGAAAAGGATCGTGGTTGTCAT TTTCCCAAAATTTTGTTGCTTACTTAGTCTACTGAAGAAGATTGCTTTGGAATCATTGATTGTGGTTTCAATTTTGAGACTTTTCTTTTTTTGTTCAAAT GAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCCCTGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCA TTGCCGGCAGTTGGAAGCCGTGTGTTTTACTTTCCACAAGGTCATAGTGAACAAGTGGCAGTGTCAACCAACAAGGAAGTGGATGCCCATATCCCCAACT ATCCAAGCTTACCACCTCAGCTTATTTGTCAGCTCCATAATCTGACTATGCATGCGGATGCTGAGACTGATGAAGTCTATGCACAGATGACCTTGCAACC TTTGAATCCTCAAGAGCAAAAGGAAGCGTACCTTCCAGCAGAGTTGGGCACTCAGAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACGGCCAGT GACACAAGCACTCATGGAGGATTCTCTGTTCCTCGTCGGGCTGCTGAAAAAGTCTTTCCTCCATTGGACTTCTCTCAACAGCCTCCCTGCCAAGAGTTAA TTGCAAGGGATTTGCATGGTATTGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGACATCTTCTTACAACTGGATGGAGTGTCTTTGTGAG TGCGAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGAATGAGAAGAACCAATTGCTTCTTGGCATTCGGCGGGCAAATCGACCACAAACTGTG ATGCCTTCATCAGTTTTGTCAAGTGACAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGTCGTTTCACCATCTTCTATA ACCCACGTGCTTGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCACACTCGAGTCTCTGTTGGTATGCGCTTCAGGATGCT ATTTGAAACAGAGGAGTCAAGTGTGAGGCGATACATGGGAACAATAACTGGCATTAGTGACATGGATCCTGTTCGGTGGCCGAATTCATATTGGCGCTCA GTGAAGGTTGGCTGGGATGAATCCACTGCAGGAGATAGGCAACCTAGAGTGTCTCTTTGGGAAATTGAGCCATTAACAACATTTCCCATGTATCCATCGC CATTCCCGCTTCGGCTTAAACGACCATGGCCTCCGGGGCTGCCTTCATTTCATGGCATGAAGGATGAAGATTTTGGAATGAATTCTCCGCTGCTGTGGCT TCGAGACCCTGATAGAGGGCTTCAGTCTATTAACTTTCAGGGGATGGGGGTTAATCCTTGGATGCAGCAAAGGTTTGATCCGTCCATGCTGAACATGCAA ACAGATATGTATCAAGCTGTGTCTGCCACTGCTCTTCCGGATATGAGGACTTTAGATCCTTCCAAACAGCATTCTTCTTCCTTAGTTCAATTTCAGCAAC CACAGAACTTCCCGAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCGCAGCAGGCTTTTCAGAATAATCAAGAGAATCAGCA GTCATCTCAATCTCAGGCACAAACTCAGATGCAGCAGCTGCAGCACCAACACTCATTCAATAGTCAGCATCAGCTTCATCACAACCAACAACCACAACAA ATGCAGCAGCAACAACAGCAGCAACCACAACAAATGGTAGATAATCAGCAGATTTCTAATGCAGTCTCTACAATGTCTCAGTTTATTTCGGCACCTCAAT CTCAATCACCACTGATGCAAGCTATCTCTTCACTGTCCCAACAACAAACGTTTTCTGATTCTAGTGCGAACCCTACCACTATTGTTTCTCCCCTGCACAA TATCTTGGGTTCGTTTGCCCTGGATGAAAATTCCCACCTTCTGAACCTTCCTAGAACAAGCTCTTGGATTCCGGTTCAGACTTCAACTGCATGGCCACCT GCCAAGCGTGTTGCAGTGGATTCTCTCCTTTCTTCCGGGGCATCTCAATGTGCTATGCTACAGGCAGATCAGTTAGGGCAGCCACAGAGTACCATGTCAA AAAATGCTATTACATTACCCCCTTTTCCTGGTAGAGAGTGCTCAATAGATCAAGAAGGGAACAATGATCCTCAAAATAATCTTTTATTTGGTGTTAATAT AGAGCCCTCATCACTTCTAGTTCAAAATGGGATGGCAGGCCTTAAGGGAGTCGTCGGCAACAGTGACTCCCCAGCCATGCCATTTCAGTCTTCTAATTTC ATGAATAACACAGACATTGACTCTTCATTGAATCATGGAATGACACGTAGCATTGGTGATTCAGGCTTCCTGCATACCCAAGAAAATGCAGGGCAAGAAA ATTCACCAAACAAGACCTTTGTCAAGGTGAGTTTTCCCAGTGTGGTTATCATGTTTCAACTCAACATTTTGATTTTCATCATTGTTCCTGTCTTGCATTT CTATTTGATAATTTTTTCGTTACAGGTTTATAAGTCAGGGTCCTTCGGAAGATCATTAGATATCACTAAATTCAGCAGCTACCACGAACTGCGTAGTGAG CTTGCTCGAATGTTTGGTCTTGAAGGTGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTTCTCCTTG GTGATGGCCCTTGGCCGTAAGTGTCCCACTGCCCATGCTTTCTTCTTTTTGCTTTTTCTCCTACTCACCCTTTTAAATGCAAAACTGAAAACTAGAGAAA CTTATTCACTTGGATTTTCAACAATATGGTTCTTTAATATACAACTAACATGTTATCTTCAGAAATAATGATGGAATTGCATATACTTTGCTTTTTGACC TTCCATATATGTTGTGGATTTAAGGTCCTTATTTTCTCTACATCTTTCTCACGTGCATGATCTTTCTTATGTCAGGGAGTTCGTAAATAGTGTGTGGTGT ATCAAGATACTTTCGCCTCAAGAAGTGCAGCAGATGGGCAACACCGGCCTTGAGCTTCTGAACTCTGTTCCAATTCAAAGGCTCTCTAATGGCATCTATG ATGACTACATGAGCCGTCAGGACCCGAGAAGTCTAAGCACTGGAATAATAAGTGTGGGATCATTAGAATACTAAATGATGTGACTGTCAATACTATGACA CTTCTATCTCTTGTAATATTACCCTTGCTTCTCAACCTTTTGTCCATGGTGGGAAGTGCTGCCTAAATTTAGTTCTATAGTCCTACTCTTTAGCCTTTTT GTTTTCCTGTTTTTCCTGCTAGGATTATTCATAAATATGATACTGTAACTATATGGCATCTTGTTATTGTGCTAGCTACAATATATACCATACTTAATCC GTTAGGAAATCAATGTGTGAAGATAGTTCCTTCTTAAAGTTACATAACTTCATTTCTAATCTTGCTTTGGCTCAAATGGTTGTGTTGCTTGACTTGACTT AGTATTTTGGACGATGGTAGAATCTCTCTTTTTCTAGAAAATATGGTAAAATGTTGGTTTGAGCATCTTTTAAGGAGACCATTGAGGTCCTTTGTTGGGA GAGTAGATCAATGGAGGTTACTCCATTCCTTAGAGGTAGAGGGGTGATAGAGTGTTATGACATTATTAATTTATATGAGTCAGAACTATATTGTTATTGT ATGTCTTATGGTAGACATTGGATGTGATATTTAAGTTTTTGACCTTAATGATTTGGCTGCTTTGCATTTTAGCATTGCAGGCACCATGCACCATCTAATT TTGCCTATTATAATCAATTTTTTGTAGTATGGAAAGAAAGAAGAATACGCAAATTATGATATTCTCCTCAGAACTCATAGGAACCACCACTTTTCGATGG TCACCCCCACCTCATGGATAATTGTCTCTACCCTTGACTACACGCCCAAGTCAATATAGTACCAAGCCACCATGAGCTACTATGTTCTGGACCAAATCAT GGATTATTGGCTGAAATGGTGGCCTTGGTTGCACATCCGGAATAAGGATGTTTTGAACTGGCTAAGATATGACAGATTCGAAGGTGAAGCTCAGAGATGC AAGCAGCGGTCAATCTTAACGGTTGTAGGTTGTAGATTTCAATTATGATTGAAGCTTATCGCCGCAAAGCTTTTAGCAGTAATAGCGGTTGACAATGGTG AGTCTCGGTACAACGATATTATTACCTTGTGATGTGAGGTTATGTTTTCAACAAATAGATTGGGAACATAACCCCATATCACAAAATTAGAGATGTGTTG GATGATGGTGCATTCCTAGTGGTTGGGTTGGGGTTAGATGAGTAAAGGTGAACATAAAA BLAST
Tissuepods
Gene nameLI_gene_180514; 
Additional informationdetails; 

Expression of Ll_transcript_516489

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_516489
BlastpAuxin response factor 6 from Oryza sativa with 62.23% of identity
BlastxAuxin response factor 6 from Arabidopsis with 85.29% of identity
Eggnogauxin response factor(ENOG410YA3R)
KeggLink to kegg annotations (4328406)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419302.1)
PfamB3 DNA binding domain (PF02362.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;