Ll_transcript_516475

Id TrinityTRINITY_DN50857_c0_g2_i8
Name TranscriptLl_transcript_516475
SequenceGAAAAGAAAAGTGAAACCTTTTCTCTCTCTCTTGAAAAATCTGACAGGATCGTACTCATACACACTCTTAAAATAATTGCAGTTTGTGTTCTCATTGATT GGAAGCTGTAAGAGAGAGAGAAAGAGAAAGGGGTAAAAGCAACAGTAGTAGTAGACTAGTAGAAGAAGAACATAGCATAGCGTGGCCACTAAGTAGTTAA GTATCAACCATAACACCATAAACTACAACAACAACTAGAACAAAGTACATACAATACCATAGCTACTGCAAAAATTTCATCTTTTTCCAACCCCATTTCT TATCTTTTCTGGGTTTTTCTGCATTCTTTGAGATCCCTTCTCTTCTGGCTGTTCATTCATTGCTCCTTCAGATCTGTTTGCTTTTCAAGTTTATTCCTTT ATTTAGCTTACTGAAAAGCAGAAGCTGCATATCTTTTGTTACTTGGTGTTGTTGGGTTCTGAAAGAATAGATATTGTAGCATGAAGTGTTCAGTTCAAAA TTGGAACTTGGGGTGTTGGGGGTTAAGTGGAGTAAAAGCTAATGAGGCATAAAGCTATTGTCTTATGTAGTGATACTGGTTTTGGTTGAGAATTGAAGGG TGGGTATTGTTTAGATTTGAAGGTTTTTTTTTGGTGAATGGGATTAGGGGACATATAACAAGGATTATATTCTTCTGTTGAAAAGGATCGTGGTTGTCAT TTTCCCAAAATTTTGTTGCTTACTTAGTCTACTGAAGAAGATTGCTTTGGAATCATTGATTGTGGTTTCAATTTTGAGACTTTTCTTTTTTTGTTCAAAT GAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCCCTGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCA TTGCCGGCAGTTGGAAGCCGTGTGTTTTACTTTCCACAAGGTCATAGTGAACAAGTGGCAGTGTCAACCAACAAGGAAGTGGATGCCCATATCCCCAACT ATCCAAGCTTACCACCTCAGCTTATTTGTCAGCTCCATAATCTGACTATGCATGCGGATGCTGAGACTGATGAAGTCTATGCACAGATGACCTTGCAACC TTTGAATCCTCAAGAGCAAAAGGAAGCGTACCTTCCAGCAGAGTTGGGCACTCAGAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACGGCCAGT GACACAAGCACTCATGGAGGATTCTCTGTTCCTCGTCGGGCTGCTGAAAAAGTCTTTCCTCCATTGGACTTCTCTCAACAGCCTCCCTGCCAAGAGTTAA TTGCAAGGGATTTGCATGGTATTGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGACATCTTCTTACAACTGGATGGAGTGTCTTTGTGAG TGCGAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGTAAGTAAATTTAATTTTTCCTGCTCACGAAAGGGTCATCCCATTATTTTTGGGACTG ATGATTGTATTTTACTCCACTCTATCAGTTTTCTCGTAATTTTGTATGAAATTTTTCCTTTGCCATCTATGTGACTGATTTGACTTGTCTCCATGCGACT TGCATGTCATTTGGGATATTCAGAAGAATATGAAGAAACATTCTTCTTTGATGTGTGGCTCAGGCTTTCAGATTTGTGGATGATTCTTATTTCTCTTATG TTGAGCACTGCTAAACTTTGTTAGTTCATGTTATATCTTATCAATGGTGTAACTCTAGTGTATTTTCTTCGATAGGAATGAGAAGAACCAATTGCTTCTT GGCATTCGGCGGGCAAATCGACCACAAACTGTGATGCCTTCATCAGTTTTGTCAAGTGACAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAG CTGCAACAAATAGTCGTTTCACCATCTTCTATAACCCACGTGCTTGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCACAC TCGAGTCTCTGTTGGTATGCGCTTCAGGATGCTATTTGAAACAGAGGAGTCAAGTGTGAGGCGATACATGGGAACAATAACTGGCATTAGTGACATGGAT CCTGTTCGGTGGCCGAATTCATATTGGCGCTCAGTGAAGGTTGGCTGGGATGAATCCACTGCAGGAGATAGGCAACCTAGAGTGTCTCTTTGGGAAATTG AGCCATTAACAACATTTCCCATGTATCCATCGCCATTCCCGCTTCGGCTTAAACGACCATGGCCTCCGGGGCTGCCTTCATTTCATGGCATGAAGGATGA AGATTTTGGAATGAATTCTCCGCTGCTGTGGCTTCGAGACCCTGATAGAGGGCTTCAGTCTATTAACTTTCAGGGGATGGGGGTTAATCCTTGGATGCAG CAAAGGTTTGATCCGTCCATGCTGAACATGCAAACAGATATGTATCAAGCTGTGTCTGCCACTGCTCTTCCGGATATGAGGACTTTAGATCCTTCCAAAC AGCATTCTTCTTCCTTAGTTCAATTTCAGCAACCACAGAACTTCCCGAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCGCA GCAGGCTTTTCAGAATAATCAAGAGAATCAGCAGTCATCTCAATCTCAGGCACAAACTCAGATGCAGCAGCTGCAGCACCAACACTCATTCAATAGTCAG CATCAGCTTCATCACAACCAACAACCACAACAAATGCAGCAGCAACAACAGCAGCAACCACAACAAATGGTAGATAATCAGCAGATTTCTAATGCAGTCT CTACAATGTCTCAGTTTATTTCGGCACCTCAATCTCAATCACCACTGATGCAAGCTATCTCTTCACTGTCCCAACAACAAACGTTTTCTGATTCTAGTGC GAACCCTACCACTATTGTTTCTCCCCTGCACAATATCTTGGGTTCGTTTGCCCTGGATGAAAATTCCCACCTTCTGAACCTTCCTAGAACAAGCTCTTGG ATTCCGGTTCAGACTTCAACTGCATGGCCACCTGCCAAGCGTGTTGCAGTGGATTCTCTCCTTTCTTCCGGGGCATCTCAATGTGCTATGCTACAGGCAG ATCAGTTAGGGCAGCCACAGAGTACCATGTCAAAAAATGCTATTACATTACCCCCTTTTCCTGGTAGAGAGTGCTCAATAGATCAAGAAGGGAACAATGA TCCTCAAAATAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCACTTCTAGTTCAAAATGGGATGGCAGGCCTTAAGGGAGTCGTCGGCAACAGTGAC TCCCCAGCCATGCCATTTCAGTCTTCTAATTTCATGAATAACACAGACATTGACTCTTCATTGAATCATGGAATGACACGTAGCATTGGTGATTCAGGCT TCCTGCATACCCAAGAAAATGCAGGGCAAGAAAATTCACCAAACAAGACCTTTGTCAAGGTGAGTTTTCCCAGTGTGGTTATCATGTTTCAACTCAACAT TTTGATTTTCATCATTGTTCCTGTCTTGCATTTCTATTTGATAATTTTTTCGTTACAGGTTTATAAGTCAGGGTCCTTCGGAAGATCATTAGATATCACT AAATTCAGCAGCTACCACGAACTGCGTAGTGAGCTTGCTCGAATGTTTGGTCTTGAAGGTGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTAT TTGTTGACCGAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAGTTCGTAAATAGTGTGTGGTGTATCAAGATACTTTCGCCTCAAGAAGT GCAGCAGATGGGCAACACCGGCCTTGAGCTTCTGAACTCTGTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATGAGCCGTCAGGACCCG AGAAGTCTAAGCACTGGAATAATAAGTGTGGGATCATTAGAATACTAAATGATGTGACTGTCAATACTATGACACTTCTATCTCTTGTAATATTACCCTT GCTTCTCAACCTTTTGTCCATGGTGGGAAGTGCTGCCTAAATTTAGTTCTATAGTCCTACTCTTTAGCCTTTTTGTTTTCCTGTTTTTCCTGCTAGGATT ATTCATAAATATGATACTGTAACTATATGGCATCTTGTTATTGTGCTAGCTACAATATATACCATACTTAATCCGTTAGGAAATCAATGTGTGAAGATAG TTCCTTCTTAAAGTTACATAACTTCATTTCTAATCTTGCTTTGGCTCAAATGGTTGTGTTGCTTGACTTGACTTAGTATTTTGGACGATGGTAGAATCTC TCTTTTTCTAGAAAATATGGTAAAATGTTGGTTTGAGCATCTTTTAAGGAGACCATTGAGGTCCTTTGTTGGGAGAGTAGATCAATGGAGGTTACTCCAT TCCTTAGAGGTAGAGGGGTGATAGAGTGTTATGACATTATTAATTTATATGAGTCAGAACTATATTGTTATTGTATGTCTTATGGTAGACATTGGATGTG ATATTTAAGTTTTTGACCTTAATGATTTGGCTGCTTTGCATTTTAGCATTGCAGGCACCATGCACCATCTAATTTTGCCTATTATAATCAATTTTTTGTA GTATGGAAAGAAAGAAGAATACGCAAATTATGATATTCTCCTCAGAACTCATAGGAACCACCACTTTTCGATGGTCACCCCCACCTCATGGATAATTGTC TCTACCCTTGACTACACGCCCAAGTCAATATAGTACCAAGCCACCATGAGCTACTATGTTCTGGACCAAATCATGGATTATTGGCTGAAATGGTGGCCTT GGTTGCACATCCGGAATAAGGATGTTTTGAACTGGCTAAGATATGACAGATTCGAAGGTGAAGCTCAGAGATGCAAGCAGCGGTCAATCTTAACGGTTGT AGGTTGTAGATTTCAATTATGATTGAAGCTTATCGCCGCAAAGCTTTTAGCAGTAATAGCGGTTGACAATGGTGAGTCTCGGTACAACGATATTATTACC TTGTGATGTGAGGTTATGTTTTCAACAAATAGATTGGGAACATAACCCCATATCACAAAATTAGAGATGTGTTGGATGATGGTGCATTCCTAGTGGTTGG GTTGGGGTTAGATGAGTAAAGGTGAACATAAAA BLAST
Tissuepods
Gene nameLI_gene_180514; 
Additional informationdetails; 

Expression of Ll_transcript_516475

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_516475
BlastpAuxin response factor 6 from Oryza sativa with 54.94% of identity
BlastxAuxin response factor 6 from Arabidopsis with 81.44% of identity
Eggnogauxin response factor(ENOG410YA3R)
KeggLink to kegg annotations (4328406)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419302.1)
PfamAuxin response factor (PF06507.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;