Ll_transcript_516726

• Id Trinity: TRINITY_DN50877_c1_g1_i1
• Name Transcript: Ll_transcript_516726
• Sequence: GTAACTACGAAACCGAGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGATTTGTTCATTCATTCCGAAATAACAATAATCTTGACGAG GGTCTAATACCATTTCTTCAATTTTAATACTACCCCAAAATCAATTTCACTTCTAAAACTATACATAATTGTATAAAGTTTAATTCTTTCATACTGGGTT TATAAGGGATTGGTGATAATTTTCAATGGCTAACCCAACAAACCCTAATGTTGGGTTCAACCCTTCAAATCCCAAAGAAACACAGAGTTCAATTTTACCA CCTCCTACAAGTTTTGTAACAGCACCTAGATTTCCTTCACCAACATTGAATTTACAAAAACAAGATCATTCCCCTAATGTTTTGTCACCAGAAAATGGTG GGTTTATTAAAACTGGTAGTTCTGTTGTTCCTCAATTGAGTACCCCTCCTGGACCTCCGGTTTTTACCTCGCCCATTCGCCCCGCTGCGGTTCCGTTTCG CACGTCCCCTGCATCGCCGCAGCCAGTTGCTTTATCTTCAAGCTCGTCTTTACCTGCATTGTCGCCTCCGCAATTTACGAATGGATCGGTTGAGTTGCAG CAGCACGGAGTTTCTAATAGTGTAATAGAAGACCATGTTCCTGATGGAGAGTCATCCTTTGTTCTTTTCTCAGCACATAAGGTATTGAAACATAAGAAAC AAGCTAATGTACCCAGTTTGGGTTTCGGGGCATTGCTCTCTCCTGGGAGAGATGTCTCAACGGGTCCTCAGGTTATACAGCGTGATCCACATCGCTGCCA AAGCTGTGGTGCTTATGCAAATATCTATTCCAACATATTGCTTGGATCAGGGCAGTGGCAGTGTGTTATATGTCGGAAACTGAATGGAAGTGGTGGTGAG TACATTGCACATAGCAAGGAAGAGCTTCACAGATTTCCTGAGTTGTCTTCAGCGATGGTTGACTATGTTCAAACTGGGAACAAGGGACCAAGTTTTGTTC CAGTTTCAGATTCCAGAGTTTCTGCCCCAGTTGTTCTTGTTATAGACGAATGTTTAGATGAACCTCACTTGCAACATCTACAGAGCTCTTTGCATGCTTT TGTTGATTCTCTACCTCCAACAGCTAGATTAGGAATTGTACTATATGGCCGTACTGTATCAGTATATGACTTTTCAGAGGAGTCAGTGTCATCCGCTGAT GTGCTTCCTGGGGACAAGTCACCGAATGAAGAATCGTTGAAAGCGTTGATTTATGGTACTGGCATATACTTGTCACCAATGCATGCTTCACTGCCTGTAG CACATGCCATATTTTCATCATTGAGGGCATACAAGATGAACACACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTAT AATTCAGGGCCCATCTGCTGATTTGTCCCGAGGGATTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTATGGG CCTGGATCTGTTCCTCATTCCTTTAGTCACCCTAATTATCCTTATATGGAAAAGACGGCATTGAAATGGATGGAGAATCTTGGTCATGAGGCTCATCGGC ACAATACTATGATAGATATTTTATGTGCTGGAACTTGCCCTGTCAGAATTCCGATCTTACAGCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCA CGATGATTTTGGGGAAGCCTTTGGTGTTAACTTGCAAAGGGCATCTGCCAGATCAGCAGGCTCTAATGGTTTGCTAGAATTGCGCACATCAGACGATATC CTCATAACTCAAGTTGTGGGTCCTGGGGAAGAGTCACACGTAGACACCCATGAATCGTTTAAAAACGATACTGCTCTTTATATCCAAATGCTGAGTGTTG AAGAAACACAAAGTTTCTCTATCTCCATGGAATCTAAAGGAGATATTAAAAGTGATTCCATATTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCA AGCCGACGTGTCAAGGGTCATCACTGTTAGACTGCCAACAGTGGATAGTATTTCGGGATATATTGAGAATGTTCAGGATGAAGTGGCTGCTGTCCTCATT GCAAAGAGAACTCTGTTACGGGCCAAAAACCATGTTGATGCAATTGATATGCGAGCAACAATAGACGAAAGAATCAAGGATATAGCTCTAAAATTTGGAT CCCAATTACCCAAATCAAAACTTCATCGCTTCCCAAAAGAGATTTCTCTCTTACCGGAACTCCTTTTCCATCTCAGGAGAGGACCACTATTGGGAAGCAT TATTGGCCATGAAGATGAAAGGTCTGTGCTGAGGAACCTGTTTTTGAATGCATCCTTTGATCTATCACTTCGAATGTTGGCTCCTCGTTGTCTGATGCAC AGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTCGCTATGCAGTCTGATGCTGCTGTAGTACTTGACCATGGCACTGATGTCTTCATTTGGT TGGGTGCTGAACTTGCAGCTGATGAAGGAAGAAGTGCTGCTGCTTTAGCTGCTTGCCGGACATTGGCAGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCC TCGTATCCTTGCGTTTAAGGAGGGTAGCTCCCAGGCTCGGTACTTCGTCTCTCGTCTCATACCAGCACACAAGGATCCTCCTTATGAGCAGGAAGCAAGA TTCCCACAACTTAGATCATTGACATCAGAACAAAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTTGATGATCCTAGTTTCTTTGAATGGATGAGAAGCT TGAAAGTGGTGCCACCAGAACCAAGTTGATCAATTATGCTCTATGCCATTTCTGCATCTTCCAAAATCAGCAACAAGGGTGCACATGTTTGGTCTTAGTT TTTATGTTTAGATGATGTTACTTACACATGTGACATGTTCCTAAAACTCTTGTTTCACTAGCTAAACTTCTATGGGATTTTATTCACTTGCTAGAAATGT TTTATAACAATTTTAAGTTCCATTTGGAGAAAATTAGTGGGATCATTTCTTGTTTGTTTAGGGAGAGAATGATTGTGAGAAAGATGTTTCAACTTTACCT TAGAACCATAAAGAATTTGTCTTAATAATTTATTATATTGATTCAAAAC
• Tissue: pods
• Gene name: LI_gene_180670;
• Additional information: details;

Expression of Ll_transcript_516726

FPKM

• PAB: 9.4
• PNAB: 8.3
• PS1: 9.2
• PS2: 8.9
• PS3: 10.2
• PW1: 7.5
• PW2: 6.3
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516726

• Blastp: Protein transport protein Sec23A from Danio with 24.75% of identity
• Blastx: Protein transport protein Sec23A from Danio with 24.75% of identity
• Eggnog: transport protein(COG5047)
• Kegg: Link to kegg annotations (406774)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418666.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;