Ll_transcript_516737

• Id Trinity: TRINITY_DN50877_c1_g1_i10
• Name Transcript: Ll_transcript_516737
• Sequence: CACCACTATCCCAACAATTCCTTTAATAGGGTAAAAGTGAGGGACAAAGATTTGTTGTCCAAAATTCTGTCTCAAAGCCTGTACCAAGCTAATAACAAAC ATCACACATCAGTCAAAAAATTAAACATTCGTATGATTCGAAGTGAGAGAGAAAGGTCTTAGGAAAATCTCGATCTCGAGGAGCTGACGTAGCTAGCAAC GTGGCATGCAGCAAGTAAAGAAACAGAAACAGGGTCCGAAGAAGAACAACATCAACGAACCAACGTAACTACGAAACCGAGGTTTCACTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCAGATTTGTTCATTCATTCCGAAATAACAATAATCTTGACGAGGGTCTAATACCATTTCTTCAATTTTAATACTACCCC AAAATCAATTTCACTTCTAAAACTATACATAATTGTATAAAGTTTAATTCTTTCATACTGGGTTTATAAGGGATTGGTGATAATTTTCAATGGCTAACCC AACAAACCCTAATGTTGGGTTCAACCCTTCAAATCCCAAAGAAACACAGAGTTCAATTTTACCACCTCCTACAAGTTTTGTAACAGCACCTAGATTTCCT TCACCAACATTGAATTTACAAAAACAAGATCATTCCCCTAATGTTTTGTCACCAGAAAATGGTGGGTTTATTAAAACTGGTAGTTCTGTTGTTCCTCAAT TGAGTACCCCTCCTGGACCTCCGGTTTTTACCTCGCCCATTCGCCCCGCTGCGGTTCCGTTTCGCACGTCCCCTGCATCGCCGCAGCCAGTTGCTTTATC TTCAAGCTCGTCTTTACCTGCATTGTCGCCTCCGCAATTTACGAATGGATCGGTTGAGTTGCAGCAGCACGGAGTTTCTAATAGTGTAATAGAAGACCAT GTTCCTGATGGAGAGTCATCCTTTGTTCTTTTCTCAGCACATAAGGTATTGAAACATAAGAAACAAGCTAATGTACCCAGTTTGGGTTTCGGGGCATTGC TCTCTCCTGGGAGAGATGTCTCAACGGGTCCTCAGGTTATACAGCGTGATCCACATCGCTGCCAAAGCTGTGGTGCTTATGCAAATATCTATTCCAACAT ATTGCTTGGATCAGGGCAGTGGCAGTGTGTTATATGTCGGAAACTGAATGGAAGTGGTGGTGAGTACATTGCACATAGCAAGGAAGAGCTTCACAGATTT CCTGAGTTGTCTTCAGCGATGGTTGACTATGTTCAAACTGGGAACAAGGGACCAAGTTTTGTTCCAGTTTCAGATTCCAGAGTTTCTGCCCCAGTTGTTC TTGTTATAGACGAATGTTTAGATGAACCTCACTTGCAACATCTACAGAGCTCTTTGCATGCTTTTGTTGATTCTCTACCTCCAACAGCTAGATTAGGAAT TGTACTATATGGCCGTACTGTATCAGTATATGACTTTTCAGAGGAGTCAGTGTCATCCGCTGATGTGCTTCCTGGGGACAAGTCACCGAATGAAGAATCG TTGAAAGCGTTGATTTATGGTACTGGCATATACTTGTCACCAATGCATGCTTCACTGCCTGTAGCACATGCCATATTTTCATCATTGAGGGCATACAAGA TGAACACACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATTTGTCCCGAGGGAT TGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTATGGGCCTGGATCTGTTCCTCATTCCTTTAGTCACCCTAAT TATCCTTATATGGAAAAGACGGCATTGAAATGGATGGAGAATCTTGGTCATGAGGCTCATCGGCACAATACTATGATAGATATTTTATGTGCTGGAACTT GCCCTGTCAGAATTCCGATCTTACAGCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCACGATGATTTTGGGGAAGCCTTTGGTGTTAACTTGCA AAGGGCATCTGCCAGATCAGCAGGCTCTAATGGTTTGCTAGAATTGCGCACATCAGACGATATCCTCATAACTCAAGTTGTGGGTCCTGGGGAAGAGTCA CACGTAGACACCCATGAATCGTTTAAAAACGATACTGCTCTTTATATCCAAATGCTGAGTGTTGAAGAAACACAAAGTTTCTCTATCTCCATGGAATCTA AAGGAGATATTAAAAGTGATTCCATATTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAAGCCGACGTGTCAAGGGTCATCACTGTTAGACTGCC AACAGTGGATAGTATTTCGGGATATATTGAGAATGTTCAGGATGAAGTGGCTGCTGTCCTCATTGCAAAGAGAACTCTGTTACGGGCCAAAAACCATGTT GATGCAATTGATATGCGAGCAACAATAGACGAAAGAATCAAGGATATAGCTCTAAAATTTGGATCCCAATTACCCAAATCAAAACTTCATCGCTTCCCAA AAGAGATTTCTCTCTTACCGGAACTCCTTTTCCATCTCAGGAGAGGACCACTATTGGGAAGCATTATTGGCCATGAAGATGAAAGGTCTGTGCTGAGGAA CCTGTTTTTGAATGCATCCTTTGATCTATCACTTCGAATGTTGGCTCCTCGTTGTCTGATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTAT GATCTCGCTATGCAGTCTGATGCTGCTGTAGTACTTGACCATGGCACTGATGTCTTCATTTGGTTGGGTGCTGAACTTGCAGCTGATGAAGGAAGAAGTG CTGCTGCTTTAGCTGCTTGCCGGACATTGGCAGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCGTTTAAGGAGGGTAGCTCCCAGGC TCGGTACTTCGTCTCTCGTCTCATACCAGCACACAAGGATCCTCCTTATGAGCAGGAAGCAAGATTCCCACAACTTAGATCATTGACATCAGAACAAAGA ACAAAGCTGAAAAGCAGTTTTGTTCACTTTGATGATCCTAGTTTCTTTGAATGGATGAGAAGCTTGAAAGTGGTGCCACCAGAACCAAGTTGATCAATTA TGCTCTATGCCATTTCTGCATCTTCCAAAATCAGCAACAAGGGTGCACATGTTTGGTCTTAGTTTTTATGTTTAGATGATGTTACTTACACATGTGACAT GTTCCTAAAACTCTTGTTTCACTAGCTAAACTTCTATGGGATTTTATTCACTTGCTAGAAATGTTTTATAACAATTTTAAGTTCCATTTGGAGAAAATTA GTGGGATCATTTCTTGTTTGTTTAGGGAGAGAATGATTGTGAGAAAGATGTTTCAACTTTACCTTAGAACCATAAAGAATTTGTCTTAATAATTTATTAT ATTGATTCAAAAC
• Tissue: pods
• Gene name: LI_gene_180670;
• Additional information: details;

Expression of Ll_transcript_516737

FPKM

• PAB: 0.5
• PNAB: 1.5
• PS1: 1.8
• PS2: 1
• PS3: 1.4
• PW1: 0.5
• PW2: 0.5
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516737

• Blastp: Protein transport protein Sec23A from Danio with 24.75% of identity
• Blastx: Protein transport protein Sec23A from Danio with 24.75% of identity
• Eggnog: transport protein(COG5047)
• Kegg: Link to kegg annotations (406774)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418666.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;