Ll_transcript_516732

• Id Trinity: TRINITY_DN50877_c1_g1_i6
• Name Transcript: Ll_transcript_516732
• Sequence: GGCAAGGAAAGAAACAGAACCGAAGGGGCCAAATAGGAAGAACATGAACGAACGCAAGTACAAAGCCGAGGTTTCAGTTTGATTTTTTGCGAATTTGCGA CGTTGTTTTTTTGTTTGCAGGTAAAAAGTAATAATAATAAAAAAATAAAGAAAACAAGAACATTTTCCCAAATTGAAAGTGGCATTGTACCCAAAAAAAA AATTGTACCAACAAATTTTGAAAGTGGCATGACATAAAATGATAAAATCTCCATTCTTTCATTCTTTCTTGTGAGTTTCTCTCAGGTACCTTTCTTTTTA TCTCTCTTCTTTTCATTCAATTCTTGATCTCTTTTCTTTCATTCAATCATTTTGTCTTATTCACTTAGCTCCTTCATTACTCTCTATATCTATACACTGG GTAACTGAGAATCTTCATTTTGTGAAGAATTTTGTTGATTTATATCATTTCTTGCCACTCTTGAATTTCAATCACAACCCAGAATCAATTTTACCTATAA AACTGTATAAATTTGTGTAAAGTTTAATTCTTTGATGCTGGGTTTATAAAGGGGACTTTACTTTCAATAAAGTTTAATTCTTTCATACTGGGTTTATAAA GGGACTTTACTTTCAATTTCAATGGCTAACCCAACACAACCTAATGTTGGGTTCACCTCTTCAAACACCCAAGAAAGACAGGGTCCAACTCCTCCTAACC CTGACAACAAGACTCCAATTTTACCTCCTCCAAGTTTTGTAACACCACCTAGGTTTCCTCCACCAACATTACATTTACAAAAGCAAGATCAAGCCTCAAA TGTTTTGTCGCCAGCGAATGACGGGGTTATTAAAACTGGTAGTGGTCATGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTTTTTACCTCACCTGTT CGCCCGGCTGCTGTTCCATTTCGCACGTCCCCTGCGTCGCCTCAGCCAGTTTCCTTTTCTTCTGGCTCATCCTTACCGGCATTGTCACCGCAACAAATTT CAAATGGTTCAGATGATTTGCAGCAGCACCAAGATTCTAATAGTATAATAAAAGACCATGTCCCTGCTGAAGACTCATCCTTTGTTCTTTTCTCAGCCCA TAAGGTATTGAAACAGAAGAAACAAGCTAATGTACCCAGTTTAGGTTTTGGGGCATTGCTCTCTCCTGGGAGGGAGGTCTCAACAGGACCACAAGTAATA CAGCGTGATCCCCATCGCTGCCAAATCTGTGGTGCTTATGCAAATATCTATTCCAATATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATATGCCGGA AACTGAATGGAAGTGGTGGCGAGTACATTGCATATAACAAGGAAGAGCTTCACAGATTTCCTGAACTATCTTCACCCATTGTTGACTATGTTCAAACTAG GAACAAGGGGCCTAGTTTTGTTCCTGTTTTGGATTCCAGAATATCTGCCCCAGTTGTTCTTGTTATAGATGAATGTTTAGATGAACCCCACTTGCAGCAT CTACAGAGCTCTTTGCATGCTTTTGTTGATTCCCTCCCTCCAACAACAAGATTAGGAATTGTACTATATGGCCGTACTGTATCAGTATATGACTTTTCAG AGGAGTCAGTAGCATCTGCTGATGTGCTTCCCGGGGACAAGTCACCAAGTCAAGAATCTTTGAAAGCGTTGATTTATGGTACTGGCATATACTTGTCACC AATGCATGCTTCACTGCCTGTAGCGCATTCCATATTTTCATCACTGAGGGCATACAAGTTGAACATACCAGAAGCTTCCAGAGATAGGTGCCTAGGAACT GCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCAGCTGATCTGTCCCGAGGGATAGTCAAAAGGTTAGGGGGAAATAGTAGAATTATTGTCTGTG CCGGTGGACCGAACACGTATGGTCCTGGATCTGTTCCGCATTCTTTTAGTCACCCTAATTATCCTTATATGGAAAAGACAGCGTTAAAATGGATGGAGAG TCTTGGTCGTGAGGCTCATCGGCACAACACTGTGGTAGATATTTTATGTGCTGGAACATGCCCTGTGAGAATTCCTATCTTACAGCCTCTTGCAAAAGCA TCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGGGAAGCATTTGGTGTTAATTTGCAAAGGGCATCTGCTAGATCAGCTGGCTCTCTTGGTTTGTTAG AATTGCGAACATCGGATGATATTCTCATAACTCAAGTTGTGGGTCCCGGGGAAGAGTCACATGTAGACACCCATGAATCATTTAAAAATGACAGTGCTCT TTATATTCAAATGCTGAGTGTTGAAGAAACACAGTGCTTCTCTATCTCCATGGAAACTAAAGGAGATATTAAAAGGGATTCTGTCTTTTTCCAGTTTGCA ATTCAGTATTCGAATGTTTATAAAGCCGATGTGTCAAGGGTCGTCACTGTTAGACTGCCAACGGTAGATAGTATTTCAGGATATCTTCAGAGTGTTCAGG ATGAAGTGGCCGCTGTCCTCATTGCAAAGAAAACTCTGTTACGGGCCAAAAACCATTCTGATGCAATTGATATGCGATCAACAATAGATGAAAGAATCAA AGATATTGCTCTAAAATTTGGATCCCAGTTGACCAAATCAAAACTTCATCGCTTCCCAAACGGGATTTCTCTCTTACCGGAACTCCTTTTCCATCTCAGG AGAGGACCACTATTGGGAAGCATTATTGGCCACGAAGATGAAAGGTCTGTTCTGAGGAATCTGTTTCTGAATGCATCCTTTGATCTATCACTTCGAATGT TGGCTCCTCGTTGTCTGATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCTATGCAGTCTGATGCTGCTGTTGTACTTGACCA TGGCACTGATGTGTTCATTTGGTTGGGTGCTGAAGTTGCAGCCGATGAAGGAAGAAGTGCTGCTGCTTTAGCTGCTTGCCGGACATTGGCAGAAGAGTTG ACTGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTTAAGGAGGGTAGCTCACAGGCTCGATATTTTGTCTCTCGTCTCATACCAGCACATAAGGATC CTCCTTATGAACAGGAAGCGAGATTCCCACAACTTAGGTCATTGACACAAGAACAGCGGACGAAGCTGAAAAGCAGTTTTGTTCACTTTGACGATCCTAG TTTCTGTGAGTGGATGCGAAGTTTGAAAGTGGTGCCACCGGAACCACGCTGATCAAGTCTGCTTTGGTGGTGGTTGATTTTTACACCAGTTGTACAAGGT TGTTGCATCTTTCAATCAGCAAGGGACTAGACATGTTTGTTTGCCTTTGTTTTTATATTTAGTTGGGGAAACAGCCAAGTTTGTTTTGATGATGTTTCAC ATGTGACATGTCCCTAAAACTCTTGCTTCAGTGTCTGAATCCATTGATTTTGTTCACTTCCCTGAATAGTATATACAATTGCAAGATGCATTTGGAGAAA AATAGTGAGACTACTCTTGTTTTTTGTGTGGAAGAGGCACATAAAAGTTTTGCAATTTACATGAAGGTGTTAAAACATACTTCAGAGTAATAAATAATTT GTCATAATAATTTATCATATTTGTTATAGGAGATATTGATTGCCAATGAATTTCTTTAATA
• Tissue: pods
• Gene name: LI_gene_180670;
• Additional information: details;

Expression of Ll_transcript_516732

FPKM

• PAB: 7.5
• PNAB: 6.4
• PS1: 7.1
• PS2: 6.2
• PS3: 7.6
• PW1: 4.1
• PW2: 5.8
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516732

• Blastp: Protein transport protein Sec23A from Silurana with 23.2% of identity
• Blastx: Protein transport protein SEC23 from Debaryomyces with 23.49% of identity
• Eggnog: transport protein(COG5047)
• Kegg: Link to kegg annotations (780116)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422297.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;