| Id Trinity | TRINITY_DN50887_c0_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_516801 |
| Sequence | GCGAAGCATCCAATTGCATGCATGAAAGAGAAAATGTTTATATATTCCGTCTCTTCTGAACCCTGCATTTGTTCCTTTCACCCATCTTTCTATCTCTTAC CATGGAATCAAATTATCCATCATTTTTTCAACTCTCTCACATTCTAATCTCATCGCCGATTATTTGAACAACGCAACCGCCGTAACTAACTTCGTTTTCT CTGTTTCTTTCTCCTTTTTCCGATCGCTGATAATTTTCTCCGTCATAGTCGTAGTTACTGAACAAGCTTCAATTTCTGTGTTCTTCTTCGATTTATGTTT TTTATCGAGGAATCACTTTTTCTCTAAAACTTTTTACTCATCTTGAACAGTTTTGCTTACGTTACTTGTAATCGACCGGAAAGATCATCGTCGTTGGAAT CGTCCATCGCCGGAGATTTAGTAGCGAAGTTAGTTTACTATTTCAGCATAAAGTGAAAAACTAATAGTAAAACAGAAATTAGAGTTTGATTCCTTGAAGA TTAACTGCGATGTTGAATTTTAATTTGAATGCTGATTCAACTGAGAACGATGACTCACTCGAGGTGTTGGAAAGGTTTCCAGAAGCTTCTTCTGGAACCT CTAATTCCTCAATCGTGAATGCGGACGGTTCCAGCAACGGAGGAGGTGACGTGGAGTCGTGCTCCACACGCGCCGGAGGAGGAAGTGGCGTTTTCACCTT CGATTTCGGAATCATGAAGGTGAAAGGCATGAACAACGTTGTGACGCCAACGAAGGAGCTGTTTCCGATGAGTTCTGGAAATTGGAAGATGCAACAACCG TCAACTTCGTCGTCGTTTCCGGCGAGGAAGAGTGGCGTGAATTTCTCATTAGATGATGGCGAAAACAGTGGGACGATGAAGATTGTTCAGGCTCAGAAAC AAACGCCTAAACAACCAGTGAAGAAGAGTAGGAGAGGACCAAGGTCTCGGAGTTCACAGTACAGAGGAGTCACTTTCTACAGAAGGACCGGTCGTTGGGA ATCACATATCTGGGATTGCGGGAAACAAGTTTATTTAGGTGGATTTGATACCGCTGATGCTGCTGCTAGGGCATACGATCGAGCTGCTATCAAGTTCAGG GGAGTTGATGCTGACATCAATTTCAATCTCACTGATTATGATGATGATCTTAAACAGATGAAAAATCTCTCCAAAGAGGAATTTGTGCACATACTACGTC GCCAAAGCACTGGTTTCTCTAGGGGGATCTCCAAATACAGAGGAGTGACACTTCATAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAA AAAGGCTTATGACAAGGCAGCTATCAAGTGCAATGGAAGGGAGGCGGTGACCAACATTGAGCCATGTAAATATGAAAGCGACATGAAACCCAAAGCCATT AATGAAGGTAGTTCTTCATAGCATGATCTCCCACTGATATATTTGATTTCCAAGTTATATAGGTATGTGTCTGCCTTCAACACAGGTGACAGTCACAATC TAGACCTCAATTTGGGCATAGCAACCCCAGGACATGGACCCAAAGAAAACAAGGAGAATCTTAAGTTCCAGCCTGTTCCTTACAACATGCATCTTGGAAG AAATTCAAGGGTGGAGACTAATGTTAATTCAGTTATTGATGGTCCAGCTTTGAAAAGTCTGGTTGTAACTGAAGATCGTCCTTCTGTCTGGAATGCCACA TATTCCAGTTTCTTTCCCACTCAGGAAAGAGGAGAGAGAATCGTCCGTCATCCTTATCAAGGACTCCCGAACTGGGGGTGGCAAACGCAGGGTCAGGTCA CTGCTACCCCAATGCCACAGTTCTGTACAGCAGCAGCAGCATCATCAGGATTCTCAATTTCAGCTACATCTCCACCAAAATCTATGAACCCATTTCCCCA GAGTCTTTGTTTTACTTCACCCAACAGTAACACACCTGTTAGCATTGCACCTCAATACTATTATCAGGTGAAATCCCCGCAGGCACCACAATAGCCTTCC CATCTTTGTAAGGCAAAGCGTAAAAAAGTCTCTGTATTCAAAACTCATTGTATGATTCAGATACTAGTCGATGTATAAACATGAAATTTGATGGCACTTC ATGGTTAAACCATTATGCACATGATGTGCGAACAAAACAAAACGCTACTTTTTTAGTCCAATAGTTTTCCAACAATTCTGTTTTCTTCTAAATTGTTTCT GGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_180765; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516801
| Blastp | Ethylene-responsive transcription factor RAP2-7 from Arabidopsis with 58.81% of identity |
|---|---|
| Blastx | Ethylene-responsive transcription factor RAP2-7 from Arabidopsis with 47.58% of identity |
| Eggnog | Transcription factor(ENOG410YD13) |
| Kegg | Link to kegg annotations (AT2G28550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458636.1) |
| Pfam | AP2 domain (PF00847.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |