Ll_transcript_386233

• Id Trinity: TRINITY_DN50905_c0_g1_i10
• Name Transcript: Ll_transcript_386233
• Sequence: CTGGAAAGTGGCTCTATGTCAAAAAGAGACACAGTAGGACCATCCATCTTCATCCACCTTTCCTCTTCTTCAAAAAGAAACAAACCCAGCATCACCAACA ACATCATCAACAACCTTCCCATTTCACAATGCTCCTCTCCCTTCTCTTCTTCCTCTCATTCCTCTCCACTCTTCACCTCTCCCTCTCTCTAACCCAAGAC GGTCTCTTCCTCTTACAAGCCAAACGCCACCTCTCCGACCCTTCCAACTCCCTCTCCTCCTGGAACTCCTCCGACCCAACCCCTTGCAACTGGTACGGCG TCACATGCCACAATACCACCGTCACCGCCGTCAACCTCACCTCCCTCTCCCTCTCCGGCCCTTTCCCCATCTCCCTCTGCAGCATCCCTTCTCTCACCTC CCTCTCCCTCTCCAACAACTTCATCAACTCCTCCCTCCCCTCCCTCACCCTCCCCAACTGCCGCCACCTCCGCCACCTCGACCTTTCCCAAAATACCCTT GTCGGCCCCATCCCACACTCTCTCTCTCAAATCTCTTCACTCCAACACATTGACCTCTCATTCAACAACCTCTCAGGCCCTATCCCCTCTTCCCTCGCTA CCTTACCAAAACTTGAATCATTGATCCTTGTTTATAACTTCCTCACTGGACCCGTTCCTGATTCTCTTGGTAACATTTCATCACTGAAACTTCTTCACCT TGCTTATAACCCCTTCACACCGAGTCACTTGCCGAGTCAACTCGCTAACTTGACCAAACTCGAGAGCCTTTGGTGCACGAGCTGCAGTCTGGTGGGTTCG ATTCCACATTCACTTGGTGCACTCGGTAACCTTAAGAACCTTGATCTAGCTGAGAATAACCTCACTGGTACTATTCCTGAATCGTTCTCTGGTTTGAAGA GTGTGACTCAGATTGAGCTCTATTCTAATTCGCTCTCTGGCAAGTTACCGCTCGGGTTATCGAACTTGACTCAGTTGGAAAGTTTTGATGCTTCGATGAA CGAGTTGACTGGGACCATTCCTGAAGGGTTGTGTGGATTGAAACTCGCCTCACTGAATTTGTTTAGCAACAATCTCGGAGGGTCGTTGCCAGAGGTGATA GCGACTTCGCCCAAACTCTACGAGCTCAAATTGTTCAACAATAACCTTGCTGGGGAGTTGCCGAGTTATTTGGGAAGAAATTCTCCCTTGAATCATATTG ATGTTTCGTATAATAACTTTTCCGGCGAGATTCCGGCAAGTTTGTGCAATGGGGGACAGTTGGAGGAGCTGATTTTGATTTACAATTCATTCTCGGGGGA AATTCCGGAGAGTTTGGGAAACTGCAAGAGCTTAAGGAGGGTTAGGCTTAGGAATAATAAACTTAATGGAGTAGTTCCTGATGGTTTTTGGGGTCTGCCC CATATGTATTTGCTTGAGGTTATCGAAAATTCTCTATCTGGGCGTGTTTCTAATTCAATCTCTGGTGCGAAAAACTTGTCATCCTTGTTGATTTCCAAGA ACCAGTTTAATGGGTCGATTCCTGATGAAATTGGGTATTTGGGTAAACTTTTGGAGTTTGATGGCAGCTATAATAAATTTTCTGACCGGCTTCCGGATAG TATGGTGAGGTTGAGCCAGTTGAATAATCTTGATCTTAGTCACAATGAATTTTCTGGAGAAATTCCGGGTGGAATTGTTCGTGATTGGACTCAGCTCAAT GATCTTAATTTAGCAAATAATAGGTTTAATGGTAAAATTCCAATTGAGTTAGGAAGCTTGCCTGCACTTAATTATCTCGATCTGTCAAGTAATTACTTTT CTGGTGAAATCCCAAAGCAGCTGCAAAATTTGAAGCTGAATGTGTTGAATTTGTCAAACAATCAGCTTTCTGGGGACATTCCTCCCCTTTTTGCCAATGA GAATTATCGGATGAGTTTTGAAGGAAATCCTGGTCTCTGTAGTGATTTACCTGGGCTTTGTCCAAGCTCTGGTGAGAGTAAGAAACGGAAGTGTTCTTGG ATTTTCAGTTTCATATTTGTGCTTGCTGGGGTTTTGTTTGTAATTGGGGTTGGCTGGTTTTACTTGAAATATAGGAGCATGAAGAAGTTGAAGAAGGGGT TTAACATTTCGAAGTGGAGGTCGTTCCACAAGTTGGGTTTTAGCGAGTTTGAGATTGTGAAATTGCTGAGTGAAGGCAATGTGATAGGGAGTGGAGCATC TGGAAAGGTATACAAGGTGGTACTTAGCAATGGTGAGGTGGTGGCAGTGAAGAAATTGTGGGGGACAACTACGAAATTTAGTGGAGTTGTTAGTTCTGAA AAAGATGAATTTGAGGCTGAAGTTGAAACACTAGGAAAGATTAGGCACAAGAATATTGTGAGGTTGTGGTGTTGCTGCAACAGTGGTGAAAGCAAGCTAC TTGTTTATGAGTATATGCCAAATGGGAGCTTGGGTGATATGTTGAAGGGTAGCAAGAAAATCTTGCTGGATTGGCCTATTAGGTATAAAATTGCTATTGA TGCCGCTGAGGGGCTTGCTTATTTGCATCACGATTGTGCTCCTCCCATTGTTCATAGGGACGTAAAATCTAACAATATATTGCTGGATGGAGAGTTTTGT GCAAAAGTTGCAGATTTTGGAGTTGCCAAAGTTGTTGGAGGAGTTGGCCCTGGGGCAGAATCCATGTCTGTAATTGCAGGATCCTATGGTTACATTGCAC CAGAATATGCATATACTCTTCGGGTGAACGAAAAGAGTGATATTTACAGTTTCGGCATGGTGATTTTAGAATTGGTAACTGGAAAACCCCCCATTGATCC AGAGTATGGGGAAAGTGATCTTGTAAAATGGGTTTCTTCCACATTAGAACAGAAAGGACTGAGCTTTGTGATTGATCCATCTTTGGATTCCAAATACACT GAGGTAATCAGCAAGGTGCTTAGTGTGGGGCTTATTTGTACAAGTTCTCTTCCTATAACTCGTCCTGCAATGAGAAGGGTGGTGAAAATGCTTCAAGAAG CAACAACAGTTCCCAAATCCACAACTGTTAAGGATGGAAAACTCTCCCCTTATTACTATGAAGAGGGTTATGTTCATCAAGGAAGTGTGGCTTGAGCATT CTTCTTAAAAATTTACAGGCACCTTCAAATTTTATGTTACAATATTTGCATGTGATAAGGGTGAGATTTTGTAGACCATCCAGTATCATTATAGTGTAGG AACCACATCAATTTAGTTGGTAGTACTTGATCCTTGAAATGAAACTGCAATTGTAAGAGGGTGATAGCTAAATATCGGTATAAAATATTCCTATTTAATT ACTGGATGGTTATATACTTAAAATAAAATGAATTCGCCTAGTATTAGAGAATGAGTATAAAAGGAAAAGATTCTTTCTTCAGAGCTTCCCGTATACTTAG GATAAAAAGTTAACAACTAAAAAT
• Tissue: pods
• Gene name: LI_gene_180898;
• Additional information: details;

Expression of Ll_transcript_386233

FPKM

• PAB: 4.1
• PNAB: 11.7
• PS1: 6.6
• PS2: 4.9
• PS3: 6.3
• PW1: 13
• PW2: 11.7
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386233

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 59.47% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 59.27% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449041.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;