Ll_transcript_386231

• Id Trinity: TRINITY_DN50905_c0_g1_i8
• Name Transcript: Ll_transcript_386231
• Sequence: CTGGAAAGTGGCTCTATGTCAAAAAGAGACACAGTAGGACCATCCATCTTCATCCACCTTTCCTCTTCTTCAAAAAGAAACAAACCCAGCATCACCAACA ACATCATCAACAACCTTCCCATTTCACAATGCTCCTCTCCCTTCTCTTCTTCCTCTCATTCCTCTCCACTCTTCACCTCTCCCTCTCTCTAACCCAAGAC GGTCTCTTCCTCTTACAAGCCAAACGCCACCTCTCCGACCCTTCCAACTCCCTCTCCTCCTGGAACTCCTCCGACCCAACCCCTTGCAACTGGTACGGCG TCACATGCCACAATACCACCGTCACCGCCGTCAACCTCACCTCCCTCTCCCTCTCCGGCCCTTTCCCCATCTCCCTCTGCAGCATCCCTTCTCTCACCTC CCTCTCCCTCTCCAACAACTTCATCAACTCCTCCCTCCCCTCCCTCACCCTCCCCAACTGCCGCCACCTCCGCCACCTCGACCTTTCCCAAAATACCCTT GTCGGCCCCATCCCACACTCTCTCTCTCAAATCTCTTCACTCCAACACATTGACCTCTCATTCAACAACCTCTCAGGCCCTATCCCCTCTTCCCTCGCTA CCTTACCAAAACTTGAATCATTGATCCTTGTTTATAACTTCCTCACTGGACCCGTTCCTGATTCTCTTGGTAACATTTCATCACTGAAACTTCTTCACCT TGCTTATAACCCCTTCACACCGAGTCACTTGCCGAGTCAACTCGCTAACTTGACCAAACTCGAGAGCCTTTGGTGCACGAGCTGCAGTCTGGTGGGTTCG ATTCCACATTCACTTGGTGCACTCGGTAACCTTAAGAACCTTGATCTAGCTGAGAATAACCTCACTGGTACTATTCCTGAATCGTTCTCTGGTTTGAAGA GTGTGACTCAGATTGAGCTCTATTCTAATTCGCTCTCTGGCAAGTTACCGCTCGGGTTATCGAACTTGACTCAGTTGGAAAGTTTTGATGCTTCGATGAA CGAGTTGACTGGGACCATTCCTGAAGGGTTGTGTGGATTGAAACTCGCCTCACTGAATTTGTTTAGCAACAATCTCGGAGGGTCGTTGCCAGAGGTGATA GCGACTTCGCCCAAACTCTACGAGCTCAAATTGTTCAACAATAACCTTGCTGGGGAGTTGCCGAGTTATTTGGGAAGAAATTCTCCCTTGAATCATATTG ATGTTTCGTATAATAACTTTTCCGGCGAGATTCCGGCAAGTTTGTGCAATGGGGGACAGTTGGAGGAGCTGATTTTGATTTACAATTCATTCTCGGGGGA AATTCCGGAGAGTTTGGGAAACTGCAAGAGCTTAAGGAGGGTTAGGCTTAGGAATAATAAACTTAATGGAGTAGTTCCTGATGGTTTTTGGGGTCTGCCC CATATGTATTTGCTTGAGGTTATCGAAAATTCTCTATCTGGGCGTGTTTCTAATTCAATCTCTGGTGCGAAAAACTTGTCATCCTTGTTGATTTCCAAGA ACCAGTTTAATGGGTCGATTCCTGATGAAATTGGGTATTTGGGTAAACTTTTGGAGTTTGATGGCAGCTATAATAAATTTTCTGACCGGCTTCCGGATAG TATGGTGAGGTTGAGCCAGTTGAATAATCTTGATCTTAGTCACAATGAATTTTCTGGAGAAATTCCGGGTGGAATTGTTCGTGATTGGACTCAGCTCAAT GATCTTAATTTAGCAAATAATAGGTTTAATGGTAAAATTCCAATTGAGTTAGGAAGCTTGCCTGCACTTAATTATCTCGATCTGTCAAGTAATTACTTTT CTGGTGAAATCCCAAAGCAGCTGCAAAATTTGAAGCTGAATGTGTTGAATTTGTCAAACAATCAGCTTTCTGGGGACATTCCTCCCCTTTTTGCCAATGA GAATTATCGGATGAGTTTTGAAGGAAATCCTGGTCTCTGTAGTGATTTACCTGGGCTTTGTCCAAGCTCTGGTGAGAGTAAGAAACGGAAGTGTTCTTGG ATTTTCAGTTTCATATTTGTGCTTGCTGGGGTTTTGTTTGTAATTGGGGTTGGCTGGTTTTACTTGAAATATAGGAGCATGAAGAAGTTGAAGAAGGGGT TTAACATTTCGAAGTGGAGGTCGTTCCACAAGTTGGGTTTTAGCGAGTTTGAGATTGTGAAATTGCTGAGTGAAGGCAATGTGATAGGGAGTGGAGCATC TGGAAAGGTATACAAGGTGGTACTTAGCAATGGTGAGGTGGTGGCAGTGAAGAAATTGTGGGGGACAACTACGAAATTTAGTGGAGTTGTTAGTTCTGAA AAAGATGAATTTGAGGCTGAAGTTGAAACACTAGGAAAGATTAGGCACAAGAATATTGTGAGGTTGTGGTGTTGCTGCAACAGTGGTGAAAGCAAGCTAC TTGTTTATGAGTATATGCCAAATGGGAGCTTGGGTGATATGTTGAAGGGTAGCAAGAAAATCTTGCTGGATTGGCCTATTAGGTATAAAATTGCTATTGA TGCCGCTGAGGGGCTTGCTTATTTGCATCACGATTGTGCTCCTCCCATTGTTCATAGGGACGTAAAATCTAACAATATATTGCTGGATGGAGAGTTTTGT GCAAAAGTTGCAGATTTTGGAGTTGCCAAAGTTGTTGGAGGAGTTGGCCCTGGGGCAGAATCCATGTCTGTGGTTGCAGGATCCTATGGTTACTTTGCAC CAGGTTTGTGAATTTGAGTTAGATATTGACTTCTATTTTTTTACCTTATATTGAATTCTTAGTTCTATTTATGCTCTCACTTTTTGATTAATATCATGCT ATGATGCTATATTAAATAACCATCATATACTATGTAATCTAGATGTATTTTTTAATGTGCAGAATATGCATATATTCTTCGGGTAAACGAAAAGAGTGAT ATTTACAGTTTCGGTGTGGTGATTTTAGAATTGGTAACTGGAAAACCCCCCATTGATCCAGAGTATGGGGAAAGTGATCTTGTAAAATGGGTTTCTTCCA CATTAGAACAGAAAGGACCAAGCTATGTGATTGACCCTTCTTTGGATTCCAAATACACTGAAGTAATCAGCAAGGTGCTTAGTGTGGGGCTTATTTGTAC AAGTTCTCTTCCTATAACTCGTCCTGCAATGAGAAGGGTGGTGAAAATGCTTAAGGAAGCAACAACAGTTCCCAAATCCACAACTGTTAAGGATGGAATA CTCTCCCCTTAGTACTATGAAGAGGCTTATGTTCATCAAGGAAGTGTGGCTTGAGCTTCTTCATTTCTTCTTAAGAATTTACAGCCACCTTCAAATTTTT GTTACAATATTTACATGTGATAAGGGATAGATTTTGTAGACCAACCAATATCATTATAGTGTAGGAACCACATCGATTTAGTTGATAGTACTTGATCCTT GAATGAAACTGCAATTGTAAGAAGTGATAGCTGAATATCTGTATAAAATATTCCTAAATAATAACTGGATGGTTGTATAGTTAAAATAAATGAAACTTGC CTTATTTAGTATTAGAGAATGAGTTAAAA
• Tissue: pods
• Gene name: LI_gene_180898;
• Additional information: details;

Expression of Ll_transcript_386231

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 1.7
• PS2: 1
• PS3: 2.8
• PW1: 0.7
• PW2: 0.5
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386231

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 58.1% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 55.87% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449041.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;