| Id Trinity | TRINITY_DN50918_c2_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_388973 |
| Sequence | AGAGAAAGAAGATGAAGAATATGTGAAAAATTCTGAAGAAGAAGAAGAAGATGATGATGATGTAGTTGGAAATGGAAAGGGTCCTGGTCCTGTTTCTGAT GATTCTCAAATGTACCCAGTTCAATCAATTCGTAGAAAGAGGGTTAGGAAGGGTCAGGTCCAGTACCTTGTAAAATGGCTGGGATGGCCGGAGTCAGCTA ACACTTGGGAGCCTCCGGAAAATCTCGCAAATGTCCCTGACATCATTGAAGCTTTTGAGCAGAGGTATTCGCTTTTTCTTCCATGTAACATTTACAGTTT TCTTCACGATTTTGCGTTCCAATTATGACCAACGATGAAAAGCATGTTCCAATTATGTTTTGCGTTTGTTTGTGTTTGCTATGATTACAAATTCGCTGCT AATAAGGATAGGTCTAACATTGTAAGAGCAGGAATTGGTTTCACTTAATGACTACTTTGTATAACTTTTCTGTTTACAAATATTTGTTTCTTCACGATTT TGAAGCTCGGGATCAGGAAAACAGCGTAAGCGTAGACACAATAATGTGTTTCATAGTGCCCAACTGAAGAAGAGGCAGGAGCGTTCTAGTACTCCTTACA GCCTTAGATGTATTACCGATACTACAGCTGACAACCATACACCTTCTGCTCCTCTGAACGAGCTTAATCTTACCGGTCATTGTGCTTTTCCTCAACCTGT GCTTTTTGCTGATGTATTGGAAGACAAAGATGATGGCAGCAATCTTAGAAAAGTGAAAGTTTCTAATGGTAGCGGGTCTTCAAATCTTACAGAACTTTCT AAAGGCAATGACGAAAATGACTACGATCCTAAGCTCAGCGAGCTTAAAGCAGCCACAACCAATGGGCATGGTGCAGACAAGCCTGTCGTACAGTGTCAAG AAGGTAAGGTTGCTGCAGACAGTGATCAAATGGATGGTCAATCGAAGGGTGTTTCCGTGGAACAAGTTCAAAGTGACCACTCCAGAGGAGGTAAAAGGAA GAAACCTTGTTCTGCAAAGAAGTTGAAGGAAGATTCACATGCTGGTGAACCTGTTACTGCAGAAAAACCAATTGGCACATCCGCCAGTACATTTGAACCG GCACGAACAGGGAATGCTGATCATGAGGGTAACAACAGTAAAAAGAAGACGGTTCTCGTTAACCCTCTCTGCAATATTATCAAGATTTTAAGGCCACTAG GCTGTTCACCTACAGCATCTGCCGAAAACCTTTGTGTGACCTTTATGGCCTTGAGGTCGGACGGAACCGAAGTGATCGTTGACAACAGATATCTCAAGTC ACACTATCCTCAACTGCTGATCGAATACTACGAGCAGCGTATCCGATACAATCCTTGATGACTGAACAGAGTATTTAAGGTTGTTTGTAGTTAGATCTGA ATGTGTTGGTAGTTTTATAGATGCAGCAAGTAGTGAACTGTTAGTGATATTTAGGTATATGATTACTATATAACTATTAGATTTGCTACATACTGTGATG ATGCATTTGTGAAGAAAGTTAAGAACAAAACTATTTTGGATTAATGTCAGGTTTTAATTTGTTAGCATATTTTGTATTTGGCAATGTTTTGAATATTGAT ATGGTTTAACTGTTAAAGGACATAGCAAATCTTTAAAATGAAATGCTATGTATCACTGAATAAGGTGGTTTGTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180991; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388973
| Blastp | Chromo domain-containing protein LHP1 from Arabidopsis with 66.04% of identity |
|---|---|
| Blastx | Chromo domain-containing protein LHP1 from Arabidopsis with 36.22% of identity |
| Eggnog | chromobox homolog(ENOG4111JKD) |
| Kegg | Link to kegg annotations (AT5G17690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465358.1) |
| Pfam | Chromo (CHRromatin Organisation MOdifier) domain (PF00385.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |