Id Trinity | TRINITY_DN50933_c3_g2_i7 |
---|---|
Name Transcript | Ll_transcript_388554 |
Sequence | GTCAAGTTAAAGCAGTTCTTGAGGAGGGAGGACATTTCTCTGGCATATATAGGAAGGTTCAACTAAAGCCACTTAAATGGGTCAAAGTTGCAAAAAACAA TGGAGAAATTGAAGAACGACCTGTTGAAGCTCTTATGGTTCTTAAGTATGGTGGTGTTCTTACACATGCTGGCAGAAAGCAGGCTGAAGAACTTGGAAGA TATTTCCGAAATAAGATATATCCAGGAGTGACTCTTGATATAGTGTATAACGCCATGATCGCCACCAACACTGTAACGCTTCAGTCATCATCTCCGCCAT TCTTTCCTTCCCCTGCCTCGCCGCTTCAGGCGGTGTCCACTCCTCTGGTGCTTCCTCTTCCGTCGATGAAATTGACAGAGAAGAATTATTTGGTGTGGCG ACTCTTTATGCTCGCAACCCTAACTTCGAAACGAGCGAATCAATTCGTGTTAAGGACTGAAATTCCTCATAGATTTATGAGTGAGGATGATGGGCTCAAA AATCGGGTGAATCCAGCATATCTTCGTTGGGAAGAGCTTGATCAAACCGTATTTTCATGGATTCTGAATTCTCTCTCTGAAGGTCTTCAACCATGTGCTG TTGGTTGTGTGCACTCATGGCAACTTTGGGAGGAACTTGACTCTTTCTACAACTCCCAAACCAAAGCACGTAGTCGGCAATTGCGATCACAACTTCGTTC TATTTCTCAAGGTTCAAGCTCTATCTCTGATTTCTTTACGAAAATCAAGGGACTTGTGGATGCATTGATCTCCATCGGCACTCCTATTTCAACATCGGAA CACATTGATTACATTCTTGATGGGTTGAATGAGGAGTATCAACCAGTAATCACATCTATTGAAAGTCAAATTAATCTTCCATCCATTCACAAGCTTGAGT CATTCTTGCTAAATTTTGAGTCTCGACTTGAGGAGAAGAAGAATAAAGTATTGTCTAATGCTCTCTCTACCAATGTAGCCATAGGTTCTGCTTCACCTCC TCCGTCAAAGCCAATACATTCATATTCGCAACAAAATCCTCTCACATCGCAAGTGGTGCTATCACTTTACTCTTCATGCCCTAAATCGCAAGTTCAAGGG TATTATGGTGGATATGGTGGCTCTGGAGGCTATCGTGTCAACCGTGGAGGTCGTCGTGGAGGTCACAATAGAAGTGGAAGAGGTTCAGGCCGTTCTTCGC CTGTGTTCTGTGTCTACTGCAACCGCCATGGACATGAAGTTAACTCTTGCTACTATGCTCCGCAAAATTTTGGTGTATCACTACCTCCTTTTTCGTATAA TATGCCACGTCAGGAACAAAATTATTTTCGGAGTTTTAATGGGCCACAACTACGCTATCCAGTCCACTTCTTTCCAGAATTTACTGACGACTTCTATTTG GGGTATTCGCCACCCTCACATCATTGTGGGCCCTCTTATTACCCATCACAACACTTTAATGAAGACTCTTTACATAGGCCTGACCCATCCTATCCTTCAA GACAACCTTTTCAACCTTATGCTATGACAAATTGTATTCTTAACAAAGCAATTCCTTCTACGAAGAACTTTAGAAATGTCACATGGTACCCTAATTCTGG GGCGACCAACCATTTGACAATGGATCCAGCCTTGCTGCATGAACCTGTGGAGTCTTTTGGTTATGACCAGATATTCATGGGAAATTAATGAGATTTTACT CCAAGGGTCTCTCACCAAGGAAGGGCTCTATGCTTTCCATGGTCTTCTTCGCAATTCTTTATCTTATCGTGCATTAGCTTTTACGATTTGTCAAACTTCT AGTTGTAATCACTTACCAATATCTAGTCTGGTATGTCTAATAAGTCTAGTTTTCCTATTTCTATTTTTTTGGCACTATAGATTGGGCCATCCTCATAAGG CCCATGTTAAACATGTTTTAGCTGGGTGTAAAATTTCACATGTTAATAAAATTGTGTTTGATTTCTGTTCATCTTGTTGAATTGACAAATCTCATAGACT TCATTCTCCTACCTCCTCTATTGTTTATAATTGTCCTTTTGACTTAGTCTATGTAGACCTATGGGGCCCTGCACCTATTTACTCAGGCACATGATTTTGT TACTATTTTTCTATTGTGGATACTTTTACCAAGCATACATGGATTTTTCTGCTTAAAGAGAAATCTGTGACACTATCCCACTTTCAGTATTTTATGAAAT ATGTTAACACTCAATTTAATCACACAATTAGAGTAGTTTGAAGTGATTAAGGGGTCAATCCAGGCCCTTTAGCAATTTTCTCAAAACCGTGGGATTGTAC ATAGGATTTCATGTCCTCATACACATCACCAACATGATATTGTAGAGAGGAACCATTCGCATATAGTTGAAATTGGACTAACCTTGTTGGCCCATTGTCA TCTTCCCATGACTTATTGGGATCATGCCTTTACAATAACTGTTTTTCTCATTAACAGTCTTCCTTTAGTCACACCCAATCTTTAATCTTCTCCTCAACTC CCTTGTTACCCTGATGATGTTTCTTTTCATTCCTCCTTATTACCTCCCTTTCAAAACACTACGTCTCATTCTTTGCCTTCTAGCTCATCCTCACCATTAG CTCCTTGTCTTGTACCTATTGTTTTTTCTCACCCTATGCAAACAAGGTCTAAGTTAGGAATCTACAAGACCATATACCCCAGTGTTCATCTTACTCAATG CGAGTCCGTGAGTGCCAAAGCTGCCTTAGCCAATACTGTATGGTAGTAGGCCATGCAAGCTAAATATGATGCTCTTATGACCTTAGGCACTTGGTTTGTA ATGCCTCTACCTCCTCATAAATAGGCAATTGGGTGTAAATGGGTTTTTAGAAATAAGTGCAAAGCTAGACTGGTTGCAAAGGGGTTTCATCAAAAACATG GAGTGGATTACAATAAAACTCTCTCCAATTGTTACTCATGTCACTATTAGAGTTTTACTCTCTCTTGTTGTTTCTCATCATTGGATGATTGAACAACTTG ACATCAATAATGCATTTTTAAATGGCTTTCTTGATGAAGAGGTCTATATGACTCAACCATTGGGTTTTCATCAACATGATAAAACTTTGATTTGTAAGCT ACATAAAGTAATCTATGGGCTCAAGCAAGCTCCAAGACAATGGTTTGAAAGGTTAAAGGGTTCTTTACTCAAACTTGGGCTTCAAGTCAACAAATGTGAC AACCCACTTTTCATTCATACCTCTTTGCCCTATAAAATTTATGTCCTAGTCTATGTTGATGACATAATTGTCACAGAGTCATCTTCTTCACATGTTCAAA AGCTTATCAAGGATCTGAATTCCACTTTTGCTCTTGAAAAGTTGGGTCCTCTTGACTATTCCCTTGGCATAGAGGTCAAACACAAAAAGGATGGTACTTT GTTTCTATCTCAGTCCAAGTATATCAGAGATCTTCTAGAAAAAGCACATCTCACTTCAACTAAAGCTCTTCCAACTCCTATGGCTAGAACTGCAAACTTA CAAAGCATGGAATTGATTTCTTTGAAGATCCTATCTTTTATAGGTATATTTTGGTGTTCTAATACCTTGTAAGAAATGGAAATGAAAAGTGAGAAATGGG AACACGAGAGAGTGAGAGAAGAGGCAGAGAATTTGAGAGACAAAGTAGAAGAGAAAACAGAATTCTTATTAATGAAAGTTAGTTTACAAAGAGAAGAGCT AGGCTCTTTATATAGAGGTACATTTAAGTGTGCTAGTTTGAAGTTAACCTTCTAACTAATCTAACAAACTAACAATCTGTTGCTGAAACAGCTAACTGAA TAACAGAAACCACAATATTGTAATATTGCACAGAATAACTTTACGAGCTCTATGTATTGGTTTTTCCTAAGACATTTGGTCTTCATACTAGAGTACTATG AATATGTGTTTTATAAAACTTTCTTCTTTCCTGCCCTGCTAACCCAAAAGTTCTGTTAGCATGCCTTGAAAGTTGGGAGATAAATTCAGTTTTATAGTTA TGCATTTAACATTTCAGCATATAAAACAGAATATTCATTTTCTAATATGAATGGTTTCTTTAAGAACAGTTTATACAATTTTTCCAGTTTAGGTCTTGTG TTAAGGTATTATGGCTGACTGAGACCTCTTATTTCCTATTTTATTAGAGTTTTATCTTGGCAGTTATTTTCAATTTATTTCCTGATTATTCTTATTTTAC GTGTGGGTTGAGCTTGTACTCGCAAAGATGGCCAGTGACCTCCTTTCCAGATTAATCTAATCTATGTGCTTTGGTTCCACCACTCGACAGGCTGTTTGGC CATATATCCACTAAGACTTATTCTGTTTGGGTCTTCTGAGGTTTGGATGTGTGGTCCCCTTGATATGCTGTAGTTTTACTAGCAAAGAGCTGAATAGGTG AAATAGGGGAGGGCAAGTTACAGGCTGTTCCAGCCAGCTAACAGCAAAGGAGGGTCTAAAAGGGGTGAGGAACAAGCAAGGGGGTCGCCAAAATATTCTG GTGGCTGGAAATAGTTGCCAGAAGCAAATTAGTGCCAAGATATGTCATGGAGAATGGAACCACATTGATACCATGTTGAAAAAGAGAGACGTGATGGAAT TGCCTGACTGATTGTGCTTAGGATATAATATTTATATGTAGGACCCTATTATTCCCAAATCCCAATGCATCATTTATTGCATGATGCATTTCCAACATTA GGAATTAGCTTGTACTAGTTGTACTACACTGCACTTGACCTAACTACTAGGATAATTAGGATCATTGTGCTAGTAATTTGTTGCACATCATCGTACATGA GAATATTGCTAAGAGTTTCGTTATTATGTTGTTCAAGTAGGAGAAGGTACAGGGTTGCTTCGCCTCCATAGTACATACCGCCATGATCTTAAGATTT BLAST |
Tissue | pods |
Gene name | LI_gene_181123; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388554
Blastp | Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1 from Arabidopsis with 88.16% of identity |
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Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.38% of identity |
Eggnog | Diphosphoinositol pentakisphosphate kinase(ENOG410XNSN) |
Kegg | Link to kegg annotations (AT3G01310) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447442.1) |
Pfam | Histidine phosphatase superfamily (branch 2) (PF00328.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |