| Id Trinity | TRINITY_DN50939_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_389072 |
| Sequence | GTCCCATGTGAGCCACTACCTACAACACTTTTGTCAATAAATTTCCTTGATTGCCAAAAGCATAACAGCACTGAAGAAGAAATGGGAAAAAAGAGCATAA GGGAATTGGGTGCAGAGGATTTTGTGAATGCAGGGTTAACTGTGGAAGAGGCCAATGAATTTGATGGAGTTTTGAGTAATATAATCTCTATCTCATCTTC TCCTACAGATACATGGCACCATTTGGTTACTAACAGATTGCTCAAACCATCTTACCCTCATTCCTTCCATCAACTTCTTTATTACTCTATCCTTCAATCT TCTCAATCACATGCTGCTGATAATGATTTTGCTGACCCTCCTCTTTATTGGTTCCCTTCTTTAGAGCAGGCCAAATGCACAAACCTTGGTCATTTCATGG AAAGATATGGTCCCAAGCTTTTAGGAGATTCCTACAAAGACCCCATTACTAGTTTCTCTCTATTTCACAAGTTTTCTGTTCAACACCCTCAGGTGTACTT GTCTCTTGTTCTCAAGGAACTTTCAGTTTCATTTGTTGAACCTCCCAAGTGTTTTTTAGATACTTCTGATCCATCTAAGCATGGAGGAACTTGGCTTCCG GGTTCTGTGTTGAATATTGCAGATTGCTGTTTGCAACCAAGTGAACACCCCAACAAAGGAGATGATAGTATAGCCATCATTTGGAGAGATGAAGGATTTG ATGATTCTGATGTGAATCGTATCACTCTCAAACAACTTCGACAACAAGTGATGTTGGTAGCGAATGCAATAGATGCCACATTCTCGAAGGGAGATGCAAT CGCAATAGACATGCAAATGACAGCCAATGCAGTTATTATATATTTAGCCATTGTTTTAGCAGGATGCATTGTTGTATCCATAGCTGAAAGCTTTGCACCA AATGAAATTGAAGCTCGCTTACGTATTTCTAAGGCAAAGGGTATTTTCACACAGGATTTCATATCAAGAGGTGGCAGGAACTTCCCTCTGTACAGTCGAG TCATTCAAGCAGCTACATGTAAAGTTATCGTGCTCCCCGTGATAGGTGATGATGTTGGAGTGAAATTAAGAGATCAAGACTTATCATGGAAGAGTTTTCT CTCCTCTAGAAGACAGAATGGCAGATCAGATCATTACACTCCAATCCATCAACCAATCGATTCTGTCACTAACATACTTTTCTCATCCGGAACCACAGGA GAGCCAAAAGCTATTCCTTGGACTCAACTTTCACCCATAAGAACTGCTGCTGATGGATGGGCTTTCATGGATTTTCAATCTGGAGATGTCTATTGCTGGC CAACAAGTTTAGGATGGGCGGTGGGACCAACGATAGTATATTCATGCTTCCTATCTGGTGCAACTCTTGCTCTCTACCATGGATCTCCTCTAGGCCATGG CTTTGGAAAATTTGTTCAGGATGCAGGTGTTACCATTTTGGGAACAGTTCCAAGCTTAGTAAAAACTTGGAAGAGTACTCATTGCATGGAGGGCTTAGAT TGGACAAAGATAAAAACATTTTGCTCCACTGGAGAAACCTCAAATGTTGACGATGACCTTTGGCTTTCTTCAAAATCTTATTACAAACCAATCATAGAAT GTTGTGGAGGCACTGAGCTTGCATCTTGTTTCATCATGGGAAGCCTATTGCAGCCTCAAGCGTTTGGAGCATTTAGCACAGCATCAATGACAACTGGCTT TGTCATCCTTGATGATAATGGAGTTCCTTATCCAGAGGATGCTCCTTGTGTTGGTGAATTGGCCTTATTCCCTCTATATATGGGAGCTAGTGATAGATTG CTTAATGCAGATCATGATGAGGTTTACTTCAAGGGAATGCCCATTTACAAAGAAAAGGTTCTTAGGAGACATGGAGCTATAATCAAGAGAACTAATGGAG GCTATTTCATCGTACAAGGGAGGGCGGATGACACCATGAATCTTGGTGGAATAAAGACAAGTTCTCTCGAAATCGAACGTGTCTGTGACAGGGCTGATGA ATGCATTTCGGAGACAGCGGCAATCAGTGTTGCACTTGGAAATGGAGGCCCTGAACAACTGGTTATACTTGCAGTTTTAAAGAATGGATACAATTCCAAT GCAGACACTTTGAAGAAGAAATTCTCTAAAGCCATTCAAAGCAACCTCAATCCTTTGTTTAAGGTAGGTTTTGTTAAAATTGTGCCAGAGTTTCCTAGAA CAGCTTCCAATAAATTATTAAGAAGAGTTTTGAGGGATCAAATGAAGCATGAGCTCTCAGTTCAGAGCAGACTTTAAAGACATAATTGGTTCTTAACAGA AGAGAGCATGCATCTTGTTTCAGTCCTTTTTCATTTGGAAACATCATATTTTCACCAAGATGTCATATAATAAAGTCATATATAATCAAATTTTATTCCA TGAAAATCCTAGTGTGCTTTTCTACATGTTGGAAATCTATACTTATCCATTTTTTGTACCTCTACATCATAATAATGTGTAATAAAAAGTTATATTCTGA TTGACCGTGACAAAGAATGAGACATCATTGAGAACATGTGATCTTTCAAATTATCAAGTGTTGTTAACAATATTATTGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_181177; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389072
| Blastp | Probable acyl-activating enzyme 18, peroxisomal from Arabidopsis with 67.8% of identity |
|---|---|
| Blastx | Probable acyl-activating enzyme 18, peroxisomal from Arabidopsis with 67.8% of identity |
| Eggnog | Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (By similarity)(COG0365) |
| Kegg | Link to kegg annotations (AT1G55320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460835.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |