Ll_transcript_386362

• Id Trinity: TRINITY_DN50940_c1_g4_i4
• Name Transcript: Ll_transcript_386362
• Sequence: CCGTAACCAATAGCCGCATTCAGAATCTTCTAATGTTCTTCTTCTTCTTCTTCTCCATTTTCTCCACTATTCTCTCTTTCTAACCCTCCCTCTCTCCAAT CATGGGAGAACTCTTCAAAATCAGTTCAATCGATTGGAAACCCTCGCCGGTCCTCGCCTTAGCCGCCAGCGTCGACGGTTTACGTGTCGCCGCCGCTCGC CAAGACGGCTCGCTTGAAATATGGCTCGTGTCGCCTGGCTCCATTGGTTGGCACTGTCAGTTAACCATTCATGGAGACGCTGATAAGCGAGTTTCGTCGC TGGTTTGGTGCACCGGTGCGGTGAATGATGAGGCGTGTGGTCGTTTATTTTCGTCTCATATTGATGGTTCTGTTACTAAGTGGGATCTTTTTCATTTGAA ACAAACGATGGTGCTAGATACCAATGGTGTCTCAATCTGGAAAATGGCTGTGACCCTCCCGAAGAGGGATGTAATAAATTCTGAAACACAAAACAATCAT GTTGGAAATGGATTCGTGAGTAAGTTTCACAGTTCTGATGAACACAACGAGAACAGTGAAAGTGATGAAGATTCTGACTCAACTGATACAATGAAACAGT CTGTTACTGAGTATCCACGTGTAGCTATTGCTTATGATGATGGATGTGTGCGGATTTATGCCATCTCTGATACAGATGATTTTATGTATGTAAAATCCTT GCCTCGGGTCAAAGGACGAGTTTTAAGTGTCACTTGGAGTGCAGATTCTAACCACATATATTCTGGCAGTAGTGATGGGCTAATACGATGCTGGGATGTT ATATCGGGCCATGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGACATGATCTTTGTATATGGTCATTACTGTCCTTAAGGTCTGGGG CACTTGTTAGTGCAGACAGCAGTGGTACTGTTCAATTTTGGGACAGCCATCATGGGACTCTCTTGCAAGCTCATTCACTACACAAGGGAGATGTAAATGC TCTGGCGGCAGCACCTAGTCATGATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTTATTCTTTATAAGCTGTCTAGTCAGCCAGCGTCATCTGACGGT GTCAATTCTCCGATAATGATGAAAAAGTGGATCTATGTTCAATGTATAAGGGCTCATACACATGATGTCAGGGCCTTGACTGTCGCTGTACCAATAACTC AAGAAGATGCTTTGCCAGATGAGAGGGTTAAACGAGCTCGACGTGAAGAAAAACCTGTTGAGTTTAGTTATCATAAGTGGGCTCATTTGGGGGTTCCCAT GCTTATCTCAGCAGGAGATGACACCAAACTCTTTGCATACCCTGTGAAAGAATTTACTAAATTTTCTCCTCATGATATCTGTCCCGCTCCTCAAAGAACA CCTATTCAACTAGTTCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTGCAGTCTTCACATGGGTTAGATATCCATTTGCTACAACTCAGAAACA TTCACACAGCTGGAGGCCGTGCAAAGACTGAAATGCTTGCCCGAGTCAAGAGTAAGGCATCTCAAAAGATAATTTGCAGCACCATTTCTAATTCAGGCAT GCTTTTTGCATACTCCGACCATTTGAAGCCTAATCTCTTCGAATTGAAGAGGTCTGAAGGTGGGAAAGTTACATGGAGTGTCAGTAAAAGGAAACTTCCT TCCAGATTACCATTTGCTCATTCCATGATTTTTACTCATGACTCCTCTTGGTTGATAGTAGCTGGGCATGATAGAAGGATATATGTTGTGGATGTGGGAA GCGCAGAACTAGTTCATACCTTTACACCTTGTCGTGATTTGCAAGATGAAAAACTACCTCCAACGGAGCCTCCAATAACAAGATTGTTCAGCAGTTCTGA TAAGCAGTGGCTGTCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCATTGGTTCATTTCACGATTAGATGGTGCC TCTGTTACTGCGGGTGGATTTCCGCCCCAGAACAGCAATGTAATGATAATTACAACCTCCTCAAATCAAGTGTATGCATTTGACATAGAAGCCAAGGAGT TGGGAGAATGGTCAAAGCGTCACACTTATGTTCTTCCCAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTTCCTCCCTCATCGTCTTC ATCTTCAGCTGTTGTTTATAGCTCCAGGGCAATGTGTTTGATTGACTTCGGGTTGCCTGTGGAGCAAGATGATAATGATATGCTAAATATTCAAGACCCA AGGGCCAAGAGTTCGCAAAATCTTGGTGTCAAGAGGAAGATTAAGCATAAGAACTTTAATGTTTTGCCATTAGAAAATCCAGTTTTATTTCTAGCCTACA TGTCAAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCAAAAGTTTAGAAGCCCCACCAGTCCACAGACATATTTTTGGGACATAAGA CTATTGTTCTCAGCTCTAGGGTTGCATTGTGGGGTTAAGACTATTCTTTCACTTCAGTTTTTACCTCTCCATGGCTGGGTTCCAGTATCATGTATTTTGT ATTTTCATAATCAATTTTGTTCTATCAGTAATAGAGTTACATTAATTTTTTGGAAAATGATATATCCTCCTACTAC
• Tissue: pods
• Gene name: LI_gene_181185;
• Additional information: details;

Expression of Ll_transcript_386362

FPKM

• PAB: 3.9
• PNAB: 13.4
• PS1: 6.7
• PS2: 7.3
• PS3: 6.5
• PW1: 7.8
• PW2: 7.2
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386362

• Blastp: U3 small nucleolar RNA-associated protein 4 homolog from Mus with 24.91% of identity
• Blastx: U3 small nucleolar RNA-associated protein 4 homolog from Mus with 25.12% of identity
• Eggnog: cirrhosis, autosomal recessive 1A (cirhin)(ENOG410XQNR)
• Kegg: Link to kegg annotations (21771)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436965.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;