| Id Trinity | TRINITY_DN50953_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_388306 |
| Sequence | AAAAAGAGTGAAGAAAGAAAGATTAAACTAAAAAGGAAGATCAAGATATTCTCTTTAGCAAAGGCCCAAAGAAGAAACATTAAATACAGCAGTAGAGCAG ATTAGAGAGAATGAATGCATTAGAGAGAAATGTGAGATAACACTTATTATAGAAAAGATGGTAGAGTCTAGCCTTAGGTGACATGGTCATGTGTAGAGCA AATCTTTAGAAGCCCCAATAAGGAGAGTAGATCATATGAAGGGTAGCCTAGAAGTTATAGGTAGAGGAAGATTGTGAAAAACTATAGGCGAAACCATTAA AAATGATTTAGCTTTATATTGTTTGTCTATAGACCTGATTTATGATAGGACATTATAATGTTATTAAGTTATTTGATCAATGTAACCAACCCACATAGTT GGATCCATGTAGCTATCATTCCTTTGAAAACTCTGATGATATGTAATTGAGGTCTTTTATTAGTAGTTAGTTGTCCTAATAAAATTACTCAACTCTTTTG TTTCCTTTCTTTTATCCCCCCTTCTCCATTCTTGTATTCAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTCGCAACAAAACA GGCCTTGCTGTTCCTTATTTTACTTCAATACATTCCGAGATTCCTCCGGATGGTACCATTGACTTCAGAACTTAAGAGAACAGGCGGTGTCTTTGCTGAA ACTGCATGGGCAGGTGCTGCATATTATTTGCTCTTATTCATGCTTGCCAGCCATATAGTTGGGTCATTTTGGTACTTGTTAGCTGTTGAACGCAATGACT CATGCTGGCAGAAGGCTTGTAGAGAATCTATTGACACCGTGTGTAATAAAAACTTCTTGTATTGTGGCAATCAATACATGAATGGTTACAGTGCCTGGCA GAATAAAAGTAAAGATACTCTCAATTCTGAGTGCTCTACAGATGATAATGCACCTTTTGATTATGGAATTTTCGAACAAGCCTTGTCATCTGGTATTGTT TCATCTAAGAAGTTCATCTCGAAGTACTGTTACTGTTTATGGTGGGGGCTCCAGAACTTGAGTACACTTGGACAGGGGCTTCAAACTAGTACCTATCCTG GGGAGGTCATATTTTCAATAGCACTAGCAATATCTGGCCTTATCCTCTTTGCACTTCTGATTGGTAACATGCAGGTATACATAAGATCAATTAGTTTAAC ATGTGAATGATGTAGGTGAGTCGGATTAAAGGACATTAAATGGTGTACTAGCCTCCAAACGGTTATCTAGAATTATTTGTATGAGCAGCTGGAGTTGACA TATGATCTGCTATAACATTACATCGAGGAAAGATTGATTTTTTGCCAGATATCTTTTTCTCCGGCTAAAACATGTATAGTTTAAATGAATGCCATTGTTG CTAGATTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_181262; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388306
| Blastp | Probable cyclic nucleotide-gated ion channel 5 from Arabidopsis with 70.37% of identity |
|---|---|
| Blastx | Probable cyclic nucleotide-gated ion channel 5 from Arabidopsis with 72.49% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT5G57940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432545.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |