Ll_transcript_389118

• Id Trinity: TRINITY_DN50957_c0_g1_i9
• Name Transcript: Ll_transcript_389118
• Sequence: CTCATTTCAATTCATTTTTTCGATTATTGCATTCGCTTCCTTCTCTATCATCATCTTCACATTTTCGTAACTTCTCTTCTTTTTTTATCATCTTGTATTC TCTTATTTCTTAATCTATTGTTTTTATATTATTCATTATAATTTGAATAATGTCTTGCTCTCTGGGTTTTGTGTTTTCGCTTACGTGAATAATTTTGTGA CCGGTTTCAGTAATCATAATTTTGATTTTGATTCTTTCTCTGTTTCAAGTAAATTGAAGTACATTTTTTTTAATGCATGCATTGCTGTATTTTAATCTTG TCACCTTTCATAAACTTTTGAAGCAATTACTCCTGAATATTTAGGAATTGTTAGGGTTTATTTTTAATGGTTTAACACTTACACACCAATTTTTTCCTCT GAATCACACACTAATACAACAAATTTAATATTGTCACATCTTTCTCAGTTACTCTATTGCACCAACCAGGATTTATTTTTTTCAATATTATTATTGGAAT TAATTTTATTACTGTAATTTTGTGTATCTGAGGTTGAATTTTGGAATTTGGATGAGCAGGTAAACATGGGAAACATGTTCAATGTGGTTGTGTTGGGTTT GTGTTTGTCAACCCTGTTGTTTTGTCCGGTCTCATGTGCACCCAATGATGATGGGTTGCATAGGATTGGACTGAAAAAGATGAAATTGGATTCAGACCGA GGTGAGCGCTTGGTTTCTCATATGGGGTTCAAAGAAGCTTCAATTTTGAGCTCTCCCATTAGAAAATATCACCTTCAAAGCAATGTCGTAGGAGCCGCGG ACACTGATATTGTTGGATTAAAGAATTACTTAGATGCTCAATACTATGGTGAAATTTCTGTTGGTACCCCTCCTCAAAAGTTCACTGTAATTTTTGATAC TGGTAGCTCTAATTTATGGGTTCCATCAGCTAGATGTTACTTATCGCTTGCATGTTACTTCCATGCGAAGTACAGGTCTAGGGAATCAAGTACCTTTAAG CCAAATGGGACTTCTGCTGCAATTCAATATGGCAGTGGAGCAATTTCTGGTTTCTTTAGCTATGACAATGTCAAAGTTGGTGATGTAACTGTCAAGAACC AGATATTTATTGAAGCAACTAGAGAGCCTGGAGTTACATTTGTGGCAGCTAAGTTCGATGGTATTCTAGGACTTGGATTTCAAGAGATATCTGTTGGAAA TGCTGTTCCAGTGTGGTACAATATGGTTGAGCAAGGTCTTGTTAAGGAACCACTATTTTCATTCTGGCTTAATCGTAATCCAAAAGAAGAGCAAGGAGGT GAGCTTGTTTTTGGTGGTGTTGATCCTGCTCACTTCAAAGGTGAACATACTTACGTGCCCGTGACACGAAAAGGATATTGGCAGTTTGACATGGGAGATG TACTTATTGGTGGTAAACCCACTGGATACTGTGCTAAAGATTGTTCAGCAATTGCAGACTCAGGGACCTCCTTGTTGGCAGGACCAACGGCTGTAATTAC TATGATAAATCAAGCCATTGGAGCCTCTGGAGTTGCAAGCCAAGAATGCAAGGCTGTTGTTAACCAGTATGGACAAACAATCCTGGACTTGCTCTTCACT GATGCACCACCAAAGAAGATCTGCTCCCAGATTGGATTATGCACCTTTGATGGGACTCACGGTGTTAGGCATGTCTCAAAAATATTATATACCTTATGTC AATCACTTAGAGATCTTAATATATTTAATGTTCACTGAATGCCATTTTAGTGATGATTATTTGAGTTTTTCTTATAGTGCGGGTATTGAGAGTGTGGTAG ACACGAACGAAAGGCAATCAAGCGGCGGCGCTCATGATGCTACTTGTACTGCTTGTGAGATGGCTGTTGTTTGGATGCAGAACCAGGTGAAGGAGAACCA GACGCAAGAGCGGATAATAGACTACGTCAATGACGTGAGTTGGTCTTAATTTTGCTATTTGAGTATTCAAATCCTGCTTCTCGGCTTGACTTCAGCCTCT AATGATGATATTGCAGCTTTGTGATAAACTGCCTAGCCCAATGGGACAATCATCTGTTGACTGTGGAAAGCTCTCATCAATGCCTAATGTTTCCTTCACC ATTGGCGGAAAAACTTTTGACCTTGCCCCAGAGGAGGTATAATGTTCTCAAAACTACCTTATGAGTTATGATCCTTTCAGTGTCTTGTTTTCGATATCTC TCCGAACCCCGAGTAGCTAGCCATTCCATTCAATGGAACTAATGTTAATACAAATAAATTCTTTAATCATTAAAGTAATATGCATCGTTAGTGTAAAACT ATTATTTTGACACGTGCACTTTCATTTTAAAACGCGGTAAATAACTATAAATTCCGATTTGTCAAAACATCATTGGAGCATGCCCTGTTCCATGTTTTAT GTTGTCCTCATCCAGTTTTGTCTTTGGTTTCTTCAGTACGTACTCAAGGTGGGTGAAGGTCCTGCAGCTCAATGCATTAGTGGCTTTACTGCTTTGGATG TTCCTCCTCCGCGCGGCCCTCTCTG
• Tissue: pods
• Gene name: LI_gene_181302;
• Additional information: details;

Expression of Ll_transcript_389118

FPKM

• PAB: 0.5
• PNAB: 0.8
• PS1: 1.5
• PS2: 0.5
• PS3: 0.7
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389118

• Blastp: Aspartic proteinase A2 from Arabidopsis with 67.39% of identity
• Blastx: Aspartic proteinase A1 from Arabidopsis with 69.49% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT1G62290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429923.1)
• Pfam: Eukaryotic aspartyl protease (PF00026.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;