Ll_transcript_388407

• Id Trinity: TRINITY_DN50967_c0_g2_i16
• Name Transcript: Ll_transcript_388407
• Sequence: GTTACATTGCACTCTTCTTCACACCTTTGTTTATCTCTCACTCAAAACAAATCAATAACAACTTCCACCATTCTCCTTCACACCCTTCCCCCAAATTAAA CAAAAGAAAAATATCGAAGAGAGAGAAACAAAAAACCAGAAAATAGAGAATAAACTGATATTGTTTTATCACTTTCTCTCAATTTGTTCATATCCGTTAC ACAACAGAGCTTTAAATATAGGCAATGGAAAACGGCAATGAGGTTTTCACACACCCTTTTGATCAAGGTTGTTTGAGAAAAGCAAGAGTAAGAGGAAAAG GAAGAGCAACAAAAATGGCTTCTTCACAAGTTAAAGTTGCTTCCTCTTCACCCTTTGGTTGCGTTCTTAGGGATCGCAACCAAATTGATGGATGCAGAGA AAGTACTGTTTTCCAATTGAAAATGAAGAATTTTATCAAAGACCACCTTAACATGTCTGCAGACTCGAAAGCGAGTGAGAAGAACAACAATTTTTTCGAA GCATCAAAGAAGAATAATACTGGTAGCCTTCGCTTCATGAGAAGCAATCAGAACAGCAACAAGGATAAGCATGAGTCCTGTTTCGCCTCGTTGATTAGCC CAAAACACTCACGGCTTCTCGATCGATGGGCTGCGAGACAAGCCCGAGAGATGGTGTCAAATTTGGAGGATGAAGCAGAGTTGTTGGCAATGCCAAATTC AAACAACAACAACAGCAACAATGAAAACACTGACATGCTTCTAAGGACATATAGTAATTCTAGCTTTAGTGATGCCTATTCTGAAACCGCTGCTCTCGGT GCTTCTTCTCTTGTTCAGATATGGGAGAACAGGCTCAACAAATCCAATGGATCCAAACCAAACACACAAATTTCTTCCAATGCATCATTGGAAGAACTAA ACAGAGGAGGTTCTGAGGCAGGGGAATCCTCTGATTCTTCGGATGATCACGAACCACTGGGGATTGAAGAACCGTTCTCCGAATGGGAATCTTATAGAAC TGCACAGAGTAATCAATCTTCGCCACAAGCAAGTTTTTCTTCATTGGAGTCAGCAGAAAGTGACAGGGTCAGTGTTGCAGATATAGTCAAAAGGCTAACT TCTATAAAGCAAGGACAGAGTCCATCACATTCAATTGGTGAAGAAAATGGCAATAAAGGACGGAGTACCTGTGTGATATTTTTTCCTTGTATAGAGCATG AACGCGGTTTCTCGCCAGAGCTTTCAGCAAACAAAGCTTTTATCCCTCAGATTACTTGCTTGCCAAGAATTAGAGGTCGCCGAGCTTTTCATGATTTGCT TATGCATTTCGTGCGTGACCGGTATGGGGAGCTCAACAATCTAGCAGAGCGTGGAGCAGTTTCAAAGTTCACACAAAGAGGGCGTATTCAGTCAGTGCTT CGGCTTCGGTTGTTGCAACGCGGGGTAGTGGCTAGTAATAAATCACACCAGAAATCAACAGCATCTGAAGTGAATAGAAAACCACAAGGATCTGCTATTA TGCAACTAAGGGAAAGATTTAATAGCGGGGTTGGTAATAGAACAACAATGCCAATAGAAGTAGCTGAACCAAGAAGTCCTCATATACAATTTGATGCCTC TAGCACAACTAATGAACTGAGCAAAGACACTTGCAGTCTTATTGTTAATAACACTACCAATCACTCTCCAGAATTCACACAAAAATCAGTGTCTCAAACG AGTGTCGATGGTCATAATAAGGAAGAAGCTCGACCATGTTCGAACACAACATTACAAGAAACATGTCTTGAGGTTGAGGTTCAGCATACTGACTCAAAAG AAACTGCTGAGGCAATTCCGTCCATGACTGAGTCAAATGTAAATAAGATGGAAGATGAGGTAGAGATAAGCAACCAAGAGTACACTATGGCTGACACAAC TTATGATGAGACAGTAGACGAAGAGGAAGAGGCCATTAACCAGCACTATGCTGAAAGCGATTATGGCAAGATAGTAGAAGAGGTTGAGGATATTGACATG AACTGTGATGAAAATAGTTACGACTGGATCAGCGAAATTTCTCGGCCTAGAAGCTACTGGGAAGAACGCAGACAAGAATGGTATAGGGAGATGCTTGACA CCGAGTCTCACAATGAAGATATATGTAAGCTCCTTGAAAGAAGAACGGTGTCAACTTTCCTTTCTAGTGACTTCCGTGATAGAATGGATAGATTGATGCA GTCTCATAGAGGAACACAAATACATTTAGTCAGTAGACAAGATGAGGATGAAGACAACCAACTGTTTGTCTCATTTTTACAAGAACACCTGCGTCCAGCA AGAAATCTGCCGGAAGACGAAAGAGAGCGAGTGGAGGAGCAAGAAGAGGACGAAGAGACGAGAAATGAGGTAGAAGAAGAGCCGGAGGAAGATATAGAGG AAGAGGAGGAAGAGAATGTAGAGGAGCATGAGGGGGAGAGGTTGATCAGTAATTCATATCATGAAGTTTGTGATTATCTTAATCAATCCTCATTGCCGAC TCAGTTGATAACATGGAGTGACAATGACAATGAAACTGGTGATGATATTCATAGAGCTGCATCTATATCCTCACCACCTTCTCAATCTCAGTCTTACTGT GAGGAAAGTCGACGAAACTTTTCATCCATGAATCATCATTCAATTGAAATGGAACTCATACATGATATGAGAGGGCATATGGAGCAACTTTATCGGGAGA TTTCTGAGCTAAGGAAATCAATGGAGACCTGCATGGATATGCAAATGCAAATGCAATTCCAACAATGCAAGAACCAACAGGTTCAATTAGTTAAAAATGA AGAGAAGAAGTCACATAACATGGGTCCAAAAAAAGGCAACTGCTGTATTTGCTATGACATGAAAGTAGATGCACTTTTGTACAGGTGCGGGCACATGTGT ACTTGCCTGAACTGTGCAAATGAGTTACAATGGAATAGTGGAAAATGTCCAATATGTAGAGCTAAAATAGTCGACGTCGTCCGTGTGTATGTTGATTTTT AAGCCTTTCTCAGTGGACACAATCTCACTCTAGAGGAATATGGTTAGTCCTGAAGCTTGGTGCGATTGCTAAGTAACTATTTTACATCATTCATCATACA TGACTTTCTCCTTTTCACATATACTTTCAAGTATATGAAGTTTTCCGGAGAAATGTGTTGGATGGCCTTCCTTGTACATTTGATAGCTTTAAATCTAACC TTTTTTCACTCTATGGTGTGTTCAGTATTACTCTTAGTCTTTCTGCTACAAAGATTTAAAGAGAGAATAAATAAGAAAACAGATACACACATGGAATTTT TGTTGGAGGTCAAAACAGCATGCCAGAAGACTCTGCAAATTCATCAGCAACCATAAATTCAATCAAAATGTACAATTCCATTGTACCTGTCAGTCATCAT ATTTTGAAATCTGGGAGTGTTACCCTCACCCACATGTACTTGTGCATAGGACTGACAATGAACCGAACCTATTCGTTTGAAACTCGACTCGTTATTTAGT TCGACAAACTTGATTCATGAGCCGAACTTGAGATGGAAATTGAGCTTATTAAATAAGCGACCTGAACTTGAGCTAAACACAATTTGATTCGTCAGGTTCT TAAGCTTGCTCGACATATACATGTATATATATAGATATATATATACTAATTTTTTATGTTTATTGTTATTATAGCAAGACAATGCATTATTTTTATGCTT ATTATTAATATATATAAACAATGTTAT
• Tissue: pods
• Gene name: LI_gene_181376;
• Additional information: details;

Expression of Ll_transcript_388407

FPKM

• PAB: 0
• PNAB: 2.7
• PS1: 1.4
• PS2: 0
• PS3: 0.3
• PW1: 1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388407

• Blastp: Protein neuralized from Sophophora with 54.72% of identity
• Blastx: Protein neuralized from Sophophora with 53.7% of identity
• Eggnog: protein ubiquitination(ENOG410ZMNG)
• Kegg: Link to kegg annotations (Dmel_CG11988)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424862.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;