| Id Trinity | TRINITY_DN50976_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_388592 |
| Sequence | CACTTTTTTATTTTCCACAAAAAATTAGAAATTCAAATCTGACGTGTCACACCGTCCTCACTCTTTCTTTTTCCCCTCAAAATCACAAATTTCACTTCTA ACTTCTCTATCTTTCTTTCTTCTTTTCTTCACTTCTACAATCTCAAGCTTTGAACTTTCTCTCTCTTATAGCTTCTAACTTCCTTTTTGAAGAGGTGAAG AGTTAAGTCACTGTTCTGGCGATAAAATCATGTTTTGGATCAGGAATTTTGGGGTCTATTTTTGTACAAGTGTATTATAGTATTTTTCTTTGGGGATTTG GTGTTAGAAAAAGATTAGTTTTTTCTTTATATGGTGTTGTGATCTGTGGCTAAGAAATATCCAACGGTAAAGTTTGAAGAAAGTTGGTCAATGGTTTCTG CTGCTATGATGATTCAGGATCAAAGTGGTGTTAGTGGATCACAGAGTGGTCCTCCTGAAGGAGATGAGGTATCTATGAGTTCTGGACTGCATTCTGTTGC ACACTTTCAACTGAATGATCAATTTTCTCGCGGGAATGACTATGCTCCAAAGGTAAGGAAACCATATACTATCACAAAACAGCGAGAGAGATGGACCAAT GAAGAACATACGAAGTTCCTTGAAGCTTTAAAGCTCTATGGTCGGGCCTGGCGACGCATTGAAGGTATCATTAGTTAATTTAGAACTTCCATATAGCTTC CGAAAATATTAGTAGTGAAGGAATATAATTGTGCCTGCTCTAAGTTTTTGGATACTTATTTTCACTATAGAGCATGTTGCCACAAAGACTGCTGTTCAGA TTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTTACTTACATCTCTATCCTATTACCATTCTTTTACCATATATCTTCTATAAACGTAGGCAATAGTT TAAGCTATGTTAAGATTTTGATGACCCCATCATATCCAAAGTGCTAACTTCTAAAGTTATTTGAGATTGGAAGAGTTCATAAATCTCAGCTTGAAATCTA TCTAACTTCTTCATCTTCATGACAGGTTCTCCATGACTCTAGTGGGAACATAAAAAACTCAGTGGAGCCTATTGAAATCCCTCCTCCTAGACCGAAACGA AAGCCAATGCATCCTTACCCTCGTAAGCTAGTAATGAGCCCTAATAAAGAAATTTCCATCCTAGACCAGCCAATGAGGTCTATTTCTCTAAAGTCATCTG ACTTTGATCAAGAAAACCAAACTCCCAAATCGGTATTATTTGCACATGGTTCAGACAGCAGCCTTGGTTCTTCTGATTCAGATACACCAAATGGAAGTTT ATCTCCAATGTCATCCATTGGTGGTGTCCATAAGACTGCATTTTCACTTTCGGAACAGAAAACAACATTTGAGGAACCTGGACTAAATGCTTATTCAGCT CATGATGAGAAACCTCTTGTGAAATTTGGGCTTCTCCCTAAAGGAAGTGCTTCTACCAAAGAAGACACAACAGAAGAATCATCTGGCCGGACTCTCAAAC TTTTTGGGATGACTCTAATGGTATCAGATACATGCAGATCATATTCTCCAACAACTGAGACATGCAAACCAACAATTGTGCATTGCTTTAGCAAGGAGGT TGCAAATTTGGAACTTCTTGGCCACACTACACCAAGTGAAACATCAGCATTATCGAAGCTAAGGGTGAGAGTGAGACCTGAAACGCCTACAAAAGGGTTT GTGCCATATAAAAGGTGCATTGCAGATAGAGAAAACCAGTCTTCATCTTTAACCGAAGATAAGCGAGAAGTGCAACGCATCAGACTTAGCTTATAGCTCC TCCCATGGATGAAGATCTAAAGTGTGTTTGAGATAGACTATAGCTGTTTCAGCTGCTGAATGAGCTGGTATGAATGAGTGAAGGAGCTGAAGATTTTGAC AATTCTGTTGCATTTGAAATTCTCCACATGTTCAAAGCCACAAACCTAGCTTTCCTTGTATAGACACACACCATGGGGCTGGGTTAGGATTTTGTATATC TACGATCACTTCTTTCCACTTCAATTGTGAATGACCCATGTTTTTTTCTTCCAACTTTTTTATGCTTATACATAATCTTCCTAGTTTTAAACCAAAAAAG AAGTCTTCCAAGTGTTAACTTACATACTTCTTTGGAGGTTATTCTAATAATGGTTGGTGTCGAAGAGCCGACATCGAGGTGCCAAATCTTCCCATAGATG TGAGCTCTTGGGGAAGATCAGCCTGTTATCCTTAGAGTAACTATTATCCGTTGAACGGCGGCTCTGAAGTCTTCCAAGTGTTAACTTACTTCTTAGGAGG ATCTTCTAATAATGGTTGGTATATACCATGATGGAATCGCTCCCAGGCAGAAGCAGATACAAAACACGCTAAAGAATTGATTATGTCTTTAGTGATAGAG AGCTAAAAGCTAATTACCAAGGAACTAGGGCGCTACATAACCAGATAGGATCAGATGGGTACTATTTTTTGGTTACTTTTGGCTCTTTGGTTGTAATATG AGGAGTTTATGCTGCTGCCTCTGAATTAATAATGTAAAATCTAACCAAGTGAAGCATCACTTATAACTCTTCCAAAGCCTCCTACTCCAATGTGAAAAGA TCATATAAAAATTATGTAAAAAGTAACAAACCATATATTCAAATGAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_181441; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388592
| Blastp | Protein REVEILLE 2 from Arabidopsis with 30.63% of identity |
|---|---|
| Blastx | Protein REVEILLE 1 from Arabidopsis with 81.48% of identity |
| Eggnog | Transcription factor(ENOG4111HV1) |
| Kegg | Link to kegg annotations (AT5G37260) |
| CantataDB | Link to cantataDB annotations (CNT0000037) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439524.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |