| Id Trinity | TRINITY_DN50976_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_388600 |
| Sequence | CACTTTTTTATTTTCCACAAAAAATTAGAAATTCAAATCTGACGTGTCACACCGTCCTCACTCTTTCTTTTTCCCCTCAAAATCACAAATTTCACTTCTA ACTTCTCTATCTTTCTTTCTTCTTTTCTTCACTTCTACAATCTCAAGCTTTGAACTTTCTCTCTCTTATAGCTTCTAACTTCCTTTTTGAAGAGGTGAAG AGTTAAGTCACTGTTCTGGCGATAAAATCATGTTTTGGATCAGGAATTTTGGGGTCTATTTTTGTACAAGTGTATTATAGTATTTTTCTTTGGGGATTTG GTGTTAGAAAAAGATTAGTTTTTTCTTTATATGGTGTTGTGATCTGTGGCTAAGAAATATCCAACGGTAAAGTTTGAAGAAAGTTGGTCAATGGTTTCTG CTGCTATGATGATTCAGGATCAAAGTGGTGTTAGTGGATCACAGAGTGGTCCTCCTGAAGGAGATGAGGTATCTATGAGTTCTGGACTGCATTCTGTTGC ACACTTTCAACTGAATGATCAATTTTCTCGCGGGAATGACTATGCTCCAAAGGTAAGGAAACCATATACTATCACAAAACAGCGAGAGAGATGGACCAAT GAAGAACATACGAAGTTCCTTGAAGCTTTAAAGCTCTATGGTCGGGCCTGGCGACGCATTGAAGAGCATGTTGCCACAAAGACTGCTGTTCAGATTCGAA GTCATGCTCAGAAGTTTTTTTCTAAGGTTCTCCATGACTCTAGTGGGAACATAAAAAACTCAGTGGAGCCTATTGAAATCCCTCCTCCTAGACCGAAACG AAAGCCAATGCATCCTTACCCTCGTAAGCTAGTAATGAGCCCTAATAAAGAAATTTCCATCCTAGACCAGCCAATGAGGTCTATTTCTCTAAAGTCATCT GACTTTGATCAAGAAAACCAAACTCCCAAATCGGTATTATTTGCACATGGTTCAGACAGCAGCCTTGGTTCTTCTGATTCAGATACACCAAATGGAAGTT TATCTCCAATGTCATCCATTGGTGGTGTCCATAAGACTGCATTTTCACTTTCGGAACAGAAAACAACATTTGAGGAACCTGGACTAAATGCTTATTCAGC TCATGATGAGAAACCTCTTGTGGTACTACTTCCTAATCAATTTCATTATATTGACTTACTTACCCGAATAGCTTGAGAAAATGATATATGATTTTGTATT CTTCTGTTTGATTTGAATGAATAGAAATTTGGGCTTCTCCCTAAAGGAAGTGCTTCTACCAAAGAAGACACAACAGAAGAATCATCTGGCCGGACTCTCA AACTTTTTGGGATGACTCTAATGGTATCAGATACATGCAGATCATATTCTCCAACAACTGAGACATGCAAACCAACAATTGTGCATTGCTTTAGCAAGGA GGTTGCAAATTTGGAACTTCTTGGCCACACTACACCAAGTGAAACATCAGCATTATCGAAGCTAAGGGTGAGAGTGAGACCTGAAACGCCTACAAAAGGG TTTGTGCCATATAAAAGGTGCATTGCAGATAGAGAAAACCAGTCTTCATCTTTAACCGAAGATAAGCGAGAAGTGCAACGCATCAGACTTAGCTTATAGC TCCTCCCATGGATGAAGATCTAAAGTGTGTTTGAGATAGACTATAGCTGTTTCAGCTGCTGAATGAGCTGGTATGAATGAGTGAAGGAGCTGAAGATTTT GACAATTCTGTTGCATTTGAAATTCTCCACATGTTCAAAGCCACAAACCTAGCTTTCCTTGTATAGACACACACCATGGGGCTGGGTTAGGATTTTGTAT ATCTACGATCACTTCTTTCCACTTCAATTGTGAATGACCCATGTTTTTTTCTTCCAACTTTTTTATGCTTATACATAATCTTCCTAGTTTTAAACCAAAA AAGAAGTCTTCCAAGTGTTAACTTACATACTTCTTTGGAGGTTATTCTAATAATGGTTGGTGTCGAAGAGCCGACATCGAGGTGCCAAATCTTCCCATAG ATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCTTAGAGTAACTATTATCCGTTGAACGGCGGCTCTGAAGTCTTCCAAGTGTTAACTTACTTCTTAGG AGGATCTTCTAATAATGGTTGGTATATACCATGATGGAATCGCTCCCAGGCAGAAGCAGATACAAAACACGCTAAAGAATTGATTATGTCTTTAGTGATA GAGAGCTAAAAGCTAATTACCAAGGAACTAGGGCGCTACATAACCAGATAGGATCAGATGGGTACTATTTTTTGGTTACTTTTGGCTCTTTGGTTGTAAT ATGAGGAGTTTATGCTGCTGCCTCTGAATTAATAATGTAAAATCTAACCAAGTGAAGCATCACTTATAACTCTTCCAAAGCCTCCTACTCCAATGTGAAA AGATCATATAAAAATTATGTAAAAAGTAACAAACCATATATTCAAATGAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_181441; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388600
| Blastp | Protein REVEILLE 1 from Arabidopsis with 64.53% of identity |
|---|---|
| Blastx | Protein REVEILLE 1 from Arabidopsis with 63.37% of identity |
| Eggnog | myb-like DNA-binding domain, SHAQKYF class family protein(ENOG41123FA) |
| Kegg | Link to kegg annotations (AT5G17300) |
| CantataDB | Link to cantataDB annotations (CNT0000037) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439524.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |