| Id Trinity | TRINITY_DN50978_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_387298 |
| Sequence | TAATCGAGTGAAAATGCAGAGACCAAAATATTACTATAACCTTTTCTTCTGCTTGAAATGATTGCTTTAGAAGTTTGAAGTGGAAGATCACAAATTTTGG GTCATAGTTTGTTTGTATGATTGTTATAGTTAGTTTCACAATGTTTGTTGTTTTGTTTGAAATCTGGAATTTTGAAGTTTCTAACTGTTCTGTTTTATGT TGGTATTAGAAGACTTCAAGAACATTAGTTATGCAACTCGTGCAAGACATTTGTTAGAGGATAATGAGTCCCAGGCTCAGAAAATGTAATCATAATGGAT ATTCTTCTGTTTATGTTGATTTTGCTCGAGGGTACATGACCAATGATGACCTTGAAACAGCCGTCAAGGAATTTGGACAAAGGTGCAGCAACATATCTAG GATATACAGGTTGTTCCTCATACATGTGCTTGTTTCTTGATTATCTATCTCAATATTCTACCTTACCGAAGGATATTATAACCCAAGATACATATTAATA TCATATTTAATGAATAAATGAACTTCTTGGAAAGGTTGTACTTATTGCAATTGCTAAACTGACTTTGAGATTTTTCTCTCTTTGAGGGATTCATGGAATG TGCAATTAGTATTGGGAAGAGTGTGAATGGAGTACCACTGTGGGTGATAGAGATTTCTGACAAGCCGGGAGAAGAAGAGGCTGAACCTGCATTTAAGTAT ATTGGAAACGTGCATGGAGATGAACCTGTGGGACGTGAGCTTCTTATATTTCTGGCCAATTGGCTATGTGATAACCATTTGAAAGATCCTCTGGCAACAT TGATTGTGGAGAATGTTCACCTTCATATCCTTCCATCAATGAATCCTGATGGGTTTAGTTTAAGAAGGCGCCGTAATGCAAATAATATTGATCTGAACCG GAATTTTCCGGACCAGTTCTTCCCTGTAAATGATGATGAGGATTCTCGGCAACCTGAAACAAGAGCAATAATGAATTGGTTGAGAGATATACGATTTACA GCATCTGCCACTTTGCATGGGGTATTACTTATTTCGAATTCACGTAATAGTTCCTTTAATCTGTAATTCTTTTATGTCTACTCTGCGCTGAGCTGTCTGT TTCCTGTTTTTTGTGATCTGTTACAGAATGTCTTCCACGAGTGTTTGCATAACTTATGTTCATTTCTTCACTGGCATCCTACCTTTTGTTTCCCCCTTCT TTTTATTAAGTGTTCGAAAAGGCCAACCAATGTGAACTAAGCCTGAATAGTTTATCTTGTTGAATTGGTGTGACGTTTGCTACGGTTTTTTTGAATTCAT CTATGATTATATGATTTATATGCAGAAGTTTGTTCATTAATGGTCTCTTTTCTGTTTTGCCACAGGGTGCACTTGTTGCAAATTATCCTTGGGATGGTAC TGAAGATAAAAAGACAAATTACTACGGATCTCCTGATGATGATACGTTTCGATTCATGGCAAGTATATATAGTCATTCTCACTATAACATGTCTTCAAGC AAGGAGTTTCCCGGTGGAATTACTAATGGAGCAGCTTGGTATCCTATATATGGGGGAATGCAAGATTGGAACTATATACATGCTGGCTGTTTCGAGCTGA CCTTGGAAGTTAGTGACGATAAATGGCCTAATGCTGCTGAGGTTAGTTCTGATCGAGCCTGAGCACTATTTAAAATTACAAGTATATAGGCAAAATAATC GGTACAACTTACTAGAGAACATTTTTTGAATCCCTGTCTGGGTATCCCTATGCTCTTTAGGTATGAGATAATGCCGTTCGTGTTATTAAGGTTTCCTATT CCCAGCAATGTGTTCCCACACTCAAACCTCTGACATTAAACACTGTTCAACTCCTTAACTCAAGCCTTCTTATCACCTGAGATGCAACCTTTTGGCATTG ATACAAGAGAACACAAAAAGGCATCACTTTGAGCTTATAAATCAGAATGACGTGTGTTAGGAAAATGTTTAAAAATGTTTTTGCCAATTGCATCTGTCAT ATAGACCAAAGGGGCAAAGAATAACAAATCCATTAAGCCATGGTCAAGTAAATGATAGTTGGAGAAGGAGGAGTTTTGGTGATAAAATCTTAGAAGACGG GATAATAGATCCCAGCCTGAATCCACAAAGAAACATGAGGTGCATCCTGAGATTATTCAAGCATTCTATTTAAAGAGCTCCCATTATAAAATAAATAGGA CTAGATAATGTTTTTGTGTGTGACATTTTCACATAGATCCATCTTAAGCAAGGCGGATTTGCATTGACCGATAATGTTTCCAATCAACTTGTACTATTTT TACGAAGATAGTAGATCCTGTCCATTCTATCACTAAGGGAATTCTCCTGTTTCAATGATCATGGATTTTCTCTATTTCCAGTTAGATAGCAATTATAATT TGGACTAAAGTTGCTCATATTCTAACCAGAAATCATCCTGCTTAACACCATCATAGCTGAGTTCATTTAATTTTGTTTCTTTTTATTGCATTGCCTTATG TTTGATGATCTTGACCAACAGAGGCATGAAATTTGATATTTGGTTTGCATGAATGGCATCTACATATTGTTGGTTATGCTTTGCTTTTCACTGTGATTCT TAGGACACTACTTGTTCTGTATGTTAATGTGCAGCTTCCTGTCATTTGGAGATATAACAAAATGAGCTTGCTTAACCTTGTTGCAAGCCTTGTGAAGACA GGAGTGCATGGTAGAATATATTCTTCGGGTGATGGAAGGCCATTGCCGGGCTTTATAACTGTCAGTGGAATAAATTACACGGTATATTTGAAACTACATT CCAGTTTTTACTGTTTTCTTCCTAGAATTTTTGTGGGTCTATACTTTTTCCTATTCACTATGATTTTTCCTTGCTATGAAGTATGTAGCTACCCATTTTT GTTCAATTGGATAATAACTGTGTGTTCACTTTGGTGATTAACTTTGGATTCGTTAATCAACAGGTTAGAGCAGGAACTGTTTTTGCTGACTACCATCGCA TACTTGCCCCAGGAGATAAATACCGAGGTATTATCGTATATTCATACATATTTCCGATTATTTTGTAATTGTAGTAGTACACGAGTGGAAGCCTTCCCCG AAGATCTTACGAAATAATTAAATATTTAAAAATGAGTGTCTCAAGTTTGACATCTAAGTGGGTTCTTAAGTTCTGTGAGGCATGAATTGCAATTGATTGG CAAAAATAAAATAAATGTTAAACCAAAAGACAAATTCAATATTGCATCCAAAAGTTCAGGACATTTAGGTTTCCTATCGAAACTCGAAAATGTAGGGCTC AAAATTAAACACATAATTACTCATCTTACATAGGTTTGACAATTTTCCTGGATAGGATATAAATCTCAGTTCCATTCCTAGGTGAATATTCTACTTCTTA GATCGTGTAACGAAATTCTGTATCTAAATTGCAGTAGTGGCGACCATGCCGGGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_181454; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387298
| Blastp | Carboxypeptidase SOL1 from Arabidopsis with 81.25% of identity |
|---|---|
| Blastx | Carboxypeptidase SOL1 from Arabidopsis with 83.33% of identity |
| Eggnog | carboxy-peptidase(ENOG410XX0H) |
| Kegg | Link to kegg annotations (AT1G71696) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442044.1) |
| Pfam | Zinc carboxypeptidase (PF00246.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |