Ll_transcript_387915

• Id Trinity: TRINITY_DN50986_c3_g1_i2
• Name Transcript: Ll_transcript_387915
• Sequence: CTCGAAACCGCGGTTCTTTCGGTCTGCCTTAACATGACTACATTGCACTACTTCATTCCTTATGCTGTTGGTGCTTCTGCAAGTACTCGGGTCTCGAATG AAATAGGAGCAGGGAATCCGAAGGCAGCGCAAGGCGCTGTTCGCGTCGTTGTGATTATCGGGATTGCAGAGGCTATTATTGTCAGCACATTCTTCTATTG TTGCAGGCATATATTAGGATATGCTTATAGCAATGACAAACAAGTTGTGGATTATGTTTCTGACATGGTTCCTGTTCTTTGTGTGTCTGTTAGTGCAGAT AGTATAATAGGAGCACTTTCTGGGGTTGCCAGAGGTGGAGGGTTTCAGAAAATAGGGGCATGTGTGAACCTTGGAGTTTATTATCTTGTAGGAGCTCCTT TAGCATTATTGTTGGGTTTTGTCTTAAAACTAAGATCAAAGGGACTTTGGATGGGAACACTAGCAACAAAAGCAAGTTATGAATCTTCTCAATAATTTGG TGACTCTGTTCTCTCTCAACTTTCTCTCAAGTTATGAATCTTGATGTGGGTGCAAAAGAAGTTATAACACAAGCTATTTATGAAGTAGTAGTAGAAGCAT GTTTCTGAATTTCATAAATGGTGAATTAGGTGTGTGATCTCACCATCCATTTGGCAAAATCATCAAATCTAAGGGTCATATTTATCTTGAATTACAGCCA CTAGGGATTCTCCTATTCATGAGGGTGTTGTGCATGTTAGCGTTGGTGTCGAATCTCCACAACATGTTCCTGTTCCTTCCACTGCAGTTGGTGTTGAATC TCCTTTTCTGTTCATTCTGCTTATGATATTCATGATGAAATTGATTATGATTTAACAATTATAGATGCAGGCGTGGATTGCTGTTAAAAGACTATTATAT ATATATATATATATATCTTTGGTATATGTGATATGTCAGCTTTATAAGTATGTTAGCATTCTGTGAGAATGAGATGAATAATTTTGTTGTTGAGAATGAA TTTGAATTTCCATCAAGTAGCAATAAATGACATTGCTTTGTGTTCATTGAATATTGAGAATGTTAGGATTGATTCAGGTTTTCATCCAAATTGATATTAA GGTACCTTTATTTAAAGATGGAAGTGATCTTGCATCATGAAAATATGTTTAATTTAGTAGATTTAGTATCATTTTCATGAGAGCATATATTTCTATTTTA ATTTAAGTTGACACAATAAATTATTAATGATATGGTATACACTACCATACAAATAATTTAGTTTAGTGATTCTGGAATATTTCATATACAGATGAAATGT TTAGATTCTGTAGGTTTTATTCTTAAACACATCTGTCTATGGGGTGATTCAGTTGTTGCTGAGAAAATAAAGAATCTGTATGTTAACAAAATTGAGAACC ATAGCAAAGCTGTGTAATCTTTGCACTTGTTCTCTTAGTTTCCACTGCATTGACAGGGAAAAAACATAATAGTTAGTGTTTTAAATTGTAGTTGTAATTG AGATTGTGGTCGCAATTGTTGTTATTGCGATCATGGTTGCGATGCAGATTGTAGTCATTGCAGTGTGAATTATTTTGTGATTCGGTATCACACCGCAATT GCGGTGTGATACGGTTGCAGCGGTCACCGCAACCGCAATATTGCGGCCGCATCACGTGATGTGGTCCGCAATTTAATACACTGCTCCCAACC
• Tissue: pods
• Gene name: LI_gene_181510;
• Additional information: details;

Expression of Ll_transcript_387915

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.2
• PS2: 0.6
• PS3: 0.2
• PW1: 0
• PW2: 3.1
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387915

• Blastp: Protein DETOXIFICATION 8 from Arabidopsis with 53.9% of identity
• Blastx: Protein DETOXIFICATION 6 from Arabidopsis with 52.63% of identity
• Eggnog: Mate efflux family protein(COG0534)
• Kegg: Link to kegg annotations (AT1G66780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456803.1)
• Pfam: MatE (PF01554.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;