Ll_transcript_461756

• Id Trinity: TRINITY_DN51175_c4_g1_i4
• Name Transcript: Ll_transcript_461756
• Sequence: CTGTGAATGGGCATGTTAGATGCCTTAGACTAGTTGTCGCCGACTTTGTTCCAAGTGCTCCTTATGAAGCTTTATATGCTCGCTCAGATGCTGACACGAC TGATGGATCAGATGTGAAAAGCAAAGGTGAACAAAGTGAATTGTCTAAGTTTGTAAACAAGGTAGCTGAGGGTGGTATTACTGCCCTTCATATGGCTGCA TTAAATGGGCATTTTGATTGTGTACAACTGCTACTTGATCTTAATGCAAATGTGTCAACTACAACAATTCATCATGGAACATCGATTGATATAATAGGCC CCGGGAGCACTCCGTTGCATTACGCTGCCTGTGGGGGCAGCCTAAAATGCTGTCAGATTCTCCTTGCAAGAGGTGCCAGTCGGATGATTGTGAATTGCAA TGAATGGCTTCCACTTGATATTGCTAGGATGTGGGGGCGTTATTGGCTTGAACCATTGCTGGCACCCATTTCCGATGCCGCAATACCGTCATTTCCGTCT TCAAAGTATCTGTCCTTGCCTCTCATGAGTGTTCTCAACATAGCCAGAGAGTTTCGATTGCAATCATCTACAACTTCTTCGAATGGAATTGAGTTTTGTG CTGTCTGTCTCGAGACGCCTTGTTCAGTGGCTGCAGAAGGATGTGGGCATGAGCTTTGTGTAAGCTGTGCTCTCCATCTTTGTTCAACAAGCAATGGTTC TCGTGACATCGTTAGCCCTCCTGGTTCTATCCCTTGCCCCCTTTGTAGGCACGGGATTGTGTCGTTTGTCAAGTTACCAGGTTCTCAAGCAAAAGAAAAT AAACAGAATGTGTCTCTCCGCCTGTGTACACCATGCATGCTACATCCACGTGATGTACATCGACCAGCCCTTTCTCATGCATCAGAGATTAGGAGAAATC GTGTAGCTTCTGTTTCTTCAGAGACGATCTGTTCCATCACTTGTACTCCATTTCCATCTATGGCAATTCCTCTATGTACTTGCAACGGTGGTTCTTGTCC ATCATTTCAATCCCGTGAAGTAGAAACTGGAGATGAACCTTCTCATAGCTCACAAGCGTCAGCATTGGATCAGAATAAAACGGAGGGGCCAAGAGTAGAA AAAACATCATGTACAAACATGTTTCGGGCTAGAAGAAGTTGCAGCAGAGAGCATCGTTGCGATTCAGAAATAAATACTGGAACTCAGTAGGTAAGAATAT GCATAGTAATATAAAATTTTAGATCAAAATAGAACTGCACAGCTATCTCATAACCAGCTTCCAATAGTTAAAGCTAGTGGATATATCAAAGAAAAAAGAT GCTTCCAACATTTGTTTTGCGAGTGTAATATCTATGTGCCGTAAGTGTAAAGATTTATACACAGTCAATAAATCATTCACCATTCATTTGTATTAATTTT TTGAAGAGTCAATGATGATTAAATATGAACGGCGAATGATACAGTAACAGTGTATAAAACTCATACGCTGTCAGTGCATACATTTTCTCTCGTTTTGCTA CAATGGTTGCATAGTAGATGGTAAATAATATTCTTGCATTTTAGCATCCCCATCACCTTTTTAGTTCTCATTTATAATATTTTATAGAGGGTTTGTAAAA ATTCATATGATCCAATTGTTATTCTAATTGGGTGTCATTTTATGAGAAAAAGAAGTATTTCTCAAGAGGAAGAATAGAAAAAATAATACCCTTATGGTTT AGCTTAGTTAAATATCAAATTAGGGGGTTTGTATTTAATGCTTGTTAGAAATTGTATACTTTTACAAAGAACAAAATTGAGTATGAAAAAGGGGTATTGT TGATGCATTTGAATATGACCATGTTGTGTGATTGATGGTGTTTCTTCCTTCACTCTGGCTCTTGCATTTTACACTAAATCACTACATATTCAATTTTAAG GAAAAGAAAAGGTAGAAAATAAATATGGGAAGTATGTTTCACTTTTTTGTTTTCCTGAAAAAGGAAAATGTAGGAGTTGGGCAAAGAATGGAAGTTTTGT AAATTTTGCGGGTTTATATTTGGTGACCTATAAATAACAGTGACTTTGTGCATTTAATGAATG
• Tissue: pods
• Gene name: LI_gene_182957;
• Additional information: details;

Expression of Ll_transcript_461756

FPKM

• PAB: 1.9
• PNAB: 1.7
• PS1: 1.5
• PS2: 2.4
• PS3: 3
• PW1: 2.1
• PW2: 1.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461756

• Blastp: E3 ubiquitin-protein ligase XBAT33 from Arabidopsis with 59.65% of identity
• Blastx: E3 ubiquitin-protein ligase XBAT33 from Arabidopsis with 59.65% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G07270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464952.1)
• Pfam: Ankyrin repeats (many copies) (PF13637.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;