| Id Trinity | TRINITY_DN51197_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_460125 |
| Sequence | GTGTTTTTATTCATTAGCTTGGTGCTAATTCTTTTGGAATAAGGTATCATCACCGTATGGATAACTAACTAATCCATTTCGGGATGTGTGATTGCCACTT CCAACAAGTATGACTCACACTAATTGAACTCTTGAACTTTTGGTCTATCTGGGAATTTAATTAAGGTTATACCATTACACCAACACCTTCTTGGTAGCCT CGTGATGAGTTTAAGGTGGAGGTAACTATGGGAAAAAGAAGAAATTATTGTTTTGTACTTGATGATTGGCTTAATTACAGCTTGACATTCTCTTGTTTCA ATGGCACAATGTGATGATTTCGATAGCTTATTTCTGGCTTAACACAAATGTTTAAGGGAGGCGTAACTAAGTAAAACCAGTGTTGGTGTAATTAGTAAAA ACAATTGCGAGCTTACTCTATAAAAATATGATTTTATTGGATCGGTTGATTATGTGAAATTCTTGAATTAGGAAATATGATTTGGTTGATTGATTTTTCA TTGTAATGTTAAACAAAAAATATCTGTTATAGGATTAAAAATATTATTTTAAATGCTTGTCACCCTGTGTATCACCATTGTCATTGTGTATCTTATTTTG TTGTGGTTGTGTTAGAAGTAAACATTTAGGAGTTCATCAATGGTTCTGTTGCCATGCTTTGTTCAATCCCTTTTTGCAGTGGGAGGGTGGGATGAATCAA AATAGGTTTTGGTACAAAAATGTTGTAAAAACAGTTAGAAAAGATAGATCGAGCTAAAAGGTTATAACCCCAAATTCAAGATTTTCTTTCTATTTTTGCT CTACTGCTTCACCATGGCTTTATGTTGTAGTAACAAATAGAAGACCGTGTCTGTATTTCATTCTTACTGGGGGATTGATGTTCCAAAAAATTGCCTCTTT ACTCTTTATACAAGATTTATTCCTCTTTTGGGCTTAATATCATTATAGTTTATACCTTATATGCATTATATATACATTACTAGTAGGGGATTGTTGCATA CTTGCATTTGTAGATATTTCAATATTCATTATTCTCTCTGTTTCTACTTATTTTTAATCATGCCACTGTTTGTTTTCCCGATATTTATTCTGTTTAAATG GGATGTCTTTGTTTACAGGTACGAGCTCGGGAGACAACCAGCGAACACAAAGCTTTCAAGCAACAAAACAGTTAGGAGAATTAGGGTCCGAGGTGGGAAT GTCAAATGGCGTGCTTTGAGGCTTGATACTGGTAACTTCTCTTGGGGGAGTGAAGCTGTGACTCGCAAAACAAGACTTCTTGATGTGGTGTATAATGCAT CCAACAATGAGTTGGTTCGTACTCAGACATTGGTCAAGAGCGCTATTGTTCAAGTTGATGCAGCACCTTTCAAGCAGTGGTATCTCCAACATTATGGTAT TGAAATTGGTCGCAAGAAGAAGAGTACAACTTCAGCCAAGAAAGAAGGCGAGGTTGCTGAAACCGCAACTGAGGAGGCGAAGAAGAGTAACCATGTCTTG AGAAAGTTGGAAAAGCGTACACAGAACCGGGTTCTCGATCCTCATATTGAAGAACAATTCGGAGGTGGTCGCCTTTTAGCTTCTATCTCATCTCGACCTG GCCAATGTGGTCGTGCTGATGGATATATATTAGAGGGCAAAGAGCTGGAGTTCTACATGAAGAAGCTTCAGAGAAAGAAGGGCAAGGGTGCTGCTGCTTA AGATCTTGTCAATCTTTCTATACCTTGTATCAGAATTTCATGTTAAAGCTATTATATTATTATATTATATATCTCAGACACAATCAGAAAATCAGTTTTG CCTGGAAAAGTACTTTTTTGGTCGGAGAGGTATTTGGGTACATTTAATTGTTTTACTTAATAGTGAGTCTTGTTTAAATAGATTATCACCACCATTATAA CTTTTCATACGTTGGTATTATTCTGTTGTTTGCCTGTGATGTTGGTTGATTCTTTTCATGTGTATCATGGGGGAATCATGATGGAAATCAAAATAATTCC CGCAAAATCAATATTAAGAAAAAAATGATGTTATAGAGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_183114; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460125
| Blastp | 40S ribosomal protein S8 from Zea with 85.79% of identity |
|---|---|
| Blastx | 40S ribosomal protein S8 from Zea with 83.67% of identity |
| Eggnog | 40S ribosomal protein S8(COG2007) |
| Kegg | Link to kegg annotations (103654822) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447106.1) |
| Pfam | Ribosomal protein S8e (PF01201.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |