| Id Trinity | TRINITY_DN51203_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_518760 |
| Sequence | TATCGAGCGAAAGTCGGCGCCGACAGCGGTCCAAAACCGACTGTCTCCGAAAATTATGAAAATTTACATAAAATTTGGAAATAATATTACGAGACTAAAA CTCAACTAGAGTTTTGTCTAATTCTTTATCGAAAATTCCCAAAAATTCATTTTCGAAAATACTTTTATTAAAATAATAATAAAACATCTTTAATTAAAAA TTCACAAAATTCGCGGTGTTACAAACCGTCGTAAGTGGGGCCTGAGTAAGTCGTTCATGGCTGCCTGAAAAGTGGATGGGGCATTGGTAAGGCCGAAGGG CATCACCAAGAACTCATAATGACCATCGAAAGTCCGAAAAGCCGTCTTGTGTGTATCGGCCGGATGAACCCGAATCTGATGGTATCCTGAACGCAAATCA ATTTTAGAAAATATTGATGCGCCCCCAACTCATCAAGTAATTCATCGATAGTAGGGATAGGAAAACGGTCGGGAATAGTGATAGCATTGAGTGCTCTGTA ATCAACACAAAATCGCCAAGAGCCATCTTTTTTTCTGACCAGTAACACTGGTGAAGAAAATGGACTATTGCTGGGAACAACGATTCCGGCCTGTAACATT TCTGTGAGCATTTTTGTCATTAAGTCTTTTTGGGAATGTGGGTATCGGTAGGGTCTAGAGTTAACAGGTTTGGCCGTGGGTTGTAAGGGAATATGGTGGT CATGTGGTCTAGTGGGTGGGAGTGTGGTGGGTGTGTGAAAGATGTGATTGTAGGTTTGTAGGAGATTGTGGATGAGTGGTTGAGTAGTGGGAAGAGAAGG GGTCATAGTAGTTTGGGAAGGAATGTGTTCGAAAGTTATAGCATGGATAGTGGCTAGGCTATGGGTCTGAAATAAGCGAGAGAGTTGGTTAAAGGAAGCG GGTTGTATGGTCAAAGAGTTGTCACCAGTAAGAGTGAGGGATGTTTGCCCAACGTTGAACTGCATAGAGGGGATTGAAAAATCAGAGATGATTGGTCCCA GAGTGCGAAGCCACTCAATTCCGAGCACAACATCTGCTCCTTTAATAGGGAGCAAGTAAAATGGAATGCGGAATTCTTCTCCCTGTAATAGAATCGGTGT CTGATCACACATGCCACTGCAATAAATATGTTCTCCATTTCCGACCATGACTGGAAACTGTTGAGTCGGTGTGATTGGGAGATGCAAAAATGAGGCTATC CGTGGTTGCAAAATATTATGCGAACTCCCTGTATCCACAAGTACTGTCACTGCATGACCGTATATAGAACCTAAGAACCGCAAGGTTTTTGGGGAAAGAT GACCCCCAAGAGCTTGATCAGAAATGTGAAAGTGAATAAGGTCATCAGCGGAAGGTACCCCCTCTAGGAGGACTGGGTCCTCAGTAGGGAAATCTGGATG GCTTAGGCTGTCCTCTGGTGTGTTCGGATCCTCATCCAAAAGTAACATAAATTGTTTGGGCTGACACCGATGTCCGGGATGATATTTTTAATCACAATTG TAGCATAACCCTTGTGCACGCCGATCTTGCATCTGTGCGAGGGACATCCGCCTAATTGACGGTGGTGAAATAGATGGTGCCTTAGGTGCTGTTTGTGGAA AGAAATTAGAAACTGGCCTGGGTGGGCGGATGGGAGGACGAGTTGCATCCTTGACCTTAGCTTCCACTAGTTTAGCGAGTCCCAATGCCTCTGATATGGT GCGAGGGCGTTGAATAGCCAACTCACGTCTGATTTCTGGTAACAAACCGGAAATAAAACAATTTAAAATTGCTTCGGGGGATAATCCCCAAATGCGATTA CTCAACTGTTCAAATCGCTTCTGATAATCCACCACGGTACTATGCTGGAAAAGTTTAAAGAGCTCTGCCTGATGGTTTGTGTATGCAGGTGGTCCAAACC GAATTTCCAAATCCCTTATAAATGATGGCCAGTCCGACAGTTGGGAATTGTGGAACATCCACTTAAACCAGCTGAGAGCCTCCCCTTGCATATAGAAAGC CACCATAGGCATACGCTGGTCAGGTGCAACTAGATGATAGTGGAAAAATTGCTCTGCTTGGAAAATCCAATCCAAGGGTTCCTTCCCATCAAACGGTAGT AAATGGAGCTTAGGGGGCCGTGGTTGGAGGTTAGGGTTAGGATGTGGTGGGCCAGATGGGGCTAGGGTTGGGTTTGGGGAAGGGTTGGGAAAGGTGGGCT GGCTAGAGTGTGGTGAGGGTTTGTTGTAGGCTGGTGAGAATGGGGGACCGTGAGGGTTGGGGGATAATGGGGGTAGTGGACCATGATGGGAGATTTGAGA GGAAGAAGGTTGTTGAGGGGAAAGAATGGTGGGATCATGAGAAATATGAGGAACAAACCTGATATCTGCAAGTTTATCCGTAATATTGTGCAAAACGGTA GTGATAGCTGCGTGTCTAGCATCCTGCAATTCCTGGTTCTCTTTCAATTTCTCAATCAGAATCCGTGTGACAGATTCGTCCGGCTCTTTTTGGACAGCTT TAGGAGGCATGAGAATGGAAATGAAAGCACCAAAATGTTAGGAAGAGTTTTGATTATCACTAGAGAGAAATTAATAAAACTAGGGTTTAAAGAATATTCA TTTTTCATACCCAATTCAGATCTGATACAAACTATTTAAAAGACTAAAGAGCAATGAGAAATAATCTCTGCCTTACAAGTGGCAGGATCTTAACACCACA ATAACAAACAGAAATAAAAACAGATTATTAATCCATCCTATACTCCTTGTGCCAAGTAGGAGGGCCTGTTGCTCGCTTAGGCCTTTTTACAATAACTGGG CCTCTATCAAATACATATAACGTAAATATAATCAATCTTCCATCACGAGTTCATATTATAAAACCTAATATGTTTCAACCATTGGGTGTAGAAATAAGAA TGATGGAGAATGATGAAGATGAAGAAAGATGTCCACTCAAAATATAATGATTATCACGTACATAAAATAAAATCTGTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_183168; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_518760
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 55.88% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423050.1) |
| Pfam | Retrotransposon gag protein (PF03732.16) |
| Rfam | - |
| GO | - |