| Id Trinity | TRINITY_DN51216_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_518748 |
| Sequence | AAAAAATATAAAAACCAATCAAGACAATACAAGACAAAACGAATTCAAGCCTTCAAAACTTCTGCAAGCTTTGTAAAACTTTCATTAAACCTTGAATACA AAATTCCTTTGAGTAAACTTTAGTCTTCAAGTAATTAAATTCTGTTTCAGTTGCGAGATTTTATTTAAAGTTTGAAATATATTTTGTTCTTATTAAATAC TCAAAATGACTACTATCAATATTGGAACAATCCCAGTCACAATTAAGCAAAACGCTGACGTCCAGATGGTCGAAAGCACCAAAAAGATTTTTCCTTTTGT TAGTGTTTCTATTAATCCTTTTGTTGATTTGGAAGCCAAGTGTGCTGAGCGGCTGAAGCGTATGGGAGAACTTTGTTTCTCACGCAAAGGGCGTTATACT ACAATGATCCCTAAACCTGATCATGTTAAAGCTGCAGAAAAGCAACAATTGGAGGAAGAGCTGAACTTCCAAAATAGTGAACACATCTTAAGTTCACTTG GAGCTGACCACACTCCCAAGCAGTATCTTGCAGGGAGTAAAGGGGAGCAAGTATCATTCAAAACACACCATTATAAGAAAAGCACTAAGAAACCTTGCAT ACAGGCGAGGAAGAAGGAGCTAAAGGGCCAGCGTAAAATACACTATATTACTAGGGAACTTCTTAACATCGTCAAAAAGAAAGATCTAGTGTTGGAAGTG GCCGATGAGCGCAAGCGTGCCAATTTTGCAACTTTCATGAAGTACGGAAAGACATACGGCATGCACGTAACTCTGAACCACATGGTGAGGAAAAGGCGTA GAGTTGATGTCACTCTGAACAGACTAATGACAGAAATTGCCACATATTGTGCAATTCCATTCGAATGTTTGGAAACATTAACTCTCAGAGAAGGACACAG TGGACTTGTTTTGAAAACCGAGACAGTGCCCAACATTCATAGCAACAAATCACAAATAACTGTTGTTAGGGGGTTAGTGAATGAAGATGGTATTCCAGTT CTTGTTGATGCAAGAAAGAGATTAACTTACAGAGCTATGAATGCCATTAGAGAATTCTCCGCTGGTGATCTGTTTTGGAAAGGGTACAATCAGACATTCA TTGACAATCGACCAGCCAATCTGAATCATCAGTGTACATCTGATCTAAATGTGACACAATGTGGGTCAGTGATGGCACTGTTAACTCTAGCTTTGTTTCC ATGTGGCCGTATCACTTGTAAGAAGTGCGTTGACAACTTCCTCAACCAGAATAACAAGGAAAGGTTTGAGAGTGCTAGTGTTTTCATTAACCAAGCAATC CAACTCTTAGATAGAGGATTCCCAGAATTCAAGCATTCAAAGGAAATTCTGTTGATGTTTAAAGAGAGGTTACAGATGGAAAATCCTGCTAGTGAGCAGT GCTTGGAGGTTGCCAAAGCCATAACATCACTGCCGGAAGCACCATTTAGCCATATTAAAGAAATCAACAGTGTTTTGTTAAAGTATGGGAGTCTCAGCAA TACTGAGGTGGGTGATGCAAGTAGGCATTTGCTTGAGGTGACTCGATATCTGAAGAATAGGACTGATTCAATTCAGAGGAATGATCTTAGCAAGTTCAGA AACAAGATTTCCTCTAAGACGCACATAAATCTAGATTTAATGTGTGACAATCAACTGGACAAGAATGCAAATTTTGTCTGGGGACAGAGAGCATACCATG CCAAACGTTTTCTCAGTAATTACTTCAATGAAATAGATCCATCGGAAGGATATGACAAATTCATCTTCAGAAAATTACCAAATGGGACGCGAGAACTAGC AATTGGCAGACTCATTATGCCAACTAATTTCGAAGCATTTAGAGAACAGATGAAAGGGAAGATGATAGACAATGGACCTATAGGCAAGGAATGTGTGTCG CGCATGAGAGGTTCATTTTGTTATCCATGTTGTTGCACAACTGATGATGTGGGGACCGCAGTTATTTCAGACTTTAAGATGCCCACAAAGTATCATTTGG TGCTAGGTGGAAATGATCTTGCCAAGTATATAGAATTGCCCACAGACACTACAGGTAACATGTACATAGCAAAGGATGGGTTCTGCCATATCAACATTTT CTTTGCCATGCTAGTGAACGTTTCAGAGGAGAAGTCCAAAGACTTCACGAAGATGGTGCGTGATCAAATCATGCCTAAGTTGGGTGAATGGCCAACGATG ATGGATGTCGCTACAGCCTGTTGGCAATTAACAGTTTGGTTTCCCGATACTTTAAGTGCTGAGTTGCCACGAATTTTAGTTGATCACAAGCTCGGAATCA TGCATGTCCTTGATTCATATGGTTCTATTAGCGCAGGATATCATGTTCTAAAAGCCAACATAGTGTCTCAGCTAATTAAGTTTGCTAGTGATGATCTCGA ATCTGAACTGAAGTATTATAGAGTTGGTGGCGATCAGAATTTCGGCAATCGAATTCGAATTGACACAAAATTCCTTCTCAAGAGTATATATAAACCTGAT CTGCTAGAGAGAATCATAGAGCATGAACCATTTTTACTAGTGTTGGCCATGCAGTCACCAGCTGTTCTGTTAGCTCTCTTTAACAGCGCTTCACTAGAGA AAGCAGTCCAGTACTGGATACACAGGGAAATGCAGGTTTCACATATAATGACACTGCTGGCTGTCTTAGCTTCAAATGTGAGTGCCTCGAGGCTATTGAC CACACAATTTGAAATCATTGAAGCGAGTGCACCTCAGATTCTCGCGGAAATGGACAAGGTTCACCAACCCATGCATTCGATTCATAGCGCCAATGTTTTC CTAATGAATATGAGTGAAAGCCGTGAAACCGACAAGACAATAGATGAATTGGGCTTTTATTCATTCAAGAAATCCAGCAGAATTTTAATGGAAAAAACCT TAATGGCGGATTTGGAGGAACAATGGCAAGGATTAGGATTGTTGGAACGATTGTCTTTAATAAAGCGATCGTGGCGAGTGCGAGCAAAGTATTCAAGCTT TGCCATCCAACGAGAAGAACCAGGTATAAGAGACAAGTTCACAACCTCACTCAGGTTATCAGGGGCTCAAGTAAAACAACAGTTGCTTGCTCAGAAGGAC CAGATTGTCCATTTTGCAGAGAAGCGGGCTGAAAGTGCTAAGAAATTTGTTGCAAACCAGTCTATAAGCCTTGTTAAGATGTGTTTACCAAGACTTGCTG ACATTGTGAATGTTTTGTCAGTCATCACATTGCTTAATGCCATATTGGTATTCATGTTAGACCACATCAAGAGGTTTAATGAGGCTAGGAGGGTAGCCCA AGAGAAGAAAGAGAAACAACATTTGAAGGAGTTAAGTGTATTGTACAACAAGTATTGGTACAGTGAAAGGCCAACATACTTGGAGTTCAAATCTGACGTG ATGGAAAAACTACCACATGCACTTGGCACTTTTGAAAAACATTACTCAGAGGATGACAAGTACACTTTTCAAGCTAAGCCAAACGACATGATCGCTCTGG AAAAGATTGTTGCAGTGACAGCTCTAATTCTCATGATCTTTGATGCGGAGAGGAGCGATTGTGTATACAAAGTTCTCAATAAGCTGAAGGGTATCTTATC AACCACCACACAAGACATGTACAAGTTTCAGAGCCTGGACACTTCAAAAACCCTCTTGGAGGATAAAAAGATGACTATAGATTTTGAGGTGAATGAAGGT GAGATGAAATCTTTTCCAGGTACACAAACAACCTTTGCAGACTGGTGGGATAACCAATTGCAGAATGGAAATGTTATAACTCACTACAGAACAGAAGGTC ATTTCATGGAGTTTACAAGGGCAAATGCGCAGCCAGTTGCAAATGAAATTGCGCACAATGATGCAAGAGACATACTCGTGAGAGGAGCAGTGGGTTCAGG GAAGTCAACTGGTTTACCATTCCACTTGAGTAATAAAGGAAAGGTCCTGATGATTGAGTCAACTAGGCCTCTGGCTGAAAATGTTTTTAAACAGTTGAAG AGTGAACCTTTTTATGCGAGCCCAACACTCAGGATGAGAGGGACAACGAGTTATGGAGCATCACCAATCACTATAATGACTAGTGGTTACGCACTGCACT ATTATGCCAATAATCCTACTTTGATGAAGGAATACAAGTTTGTTATTATAGATGAGTGCCATGTGCATGATGCTAACGCAATTGCATTTGTTAGCCTTTT GAAAGAATACTCGTTTGAAGGTAAACTCATCAAGGTATCAGCAACACCTCCGGGAAGGGAAGTTGAGTTCACAACACAATATCCAGTGACATTGGTGACA GAGGAGAGCCTATCATTTGAACAATTTGTTTCCCAACAAGGCACTGGGGCCAACTGTGATATGCTAGATGTTTGTGATAACATACTTGTTTATGTGGCGA GTTACAACGAAGTTGATCAGCTGTCCAAATTATTGCTCGAAAGGGGTCACATCGTCACAAAGGTTGATGGCAGAACAATGAAGAGTGGGAAGACTGAAAT TGAGAGTAAGGGTAGCAAATCCAAGCGACACTTCATTGTAGCCACGAACATCATTGAAAATGGTGTAACATTGGATATAGAGGGAGTTGTAGACTTTGGA TTGAAAGTGGTTCCAGAACTGGATGTGGACAACAGATTGATGCGGTACACCAAGCAGAATGTCTCTTATGGGGAAAGAATTCAAAGACTCGGAAGAGTTG GGAGACATAAAGCTGGCAAAGCCTTAAGGATCGGGATAACTGAGAAGGGACTTGTTAAACCACCAAGTGTTATCACAACAGAAGCAGCGTTTTATTGCTT TGCTTACGGTTTGCCCGTCATGGCTGAAGGGGTTTCGCCAAGTTTATTGAGTAAGTGCACAGTGCAGCAAGCAAGAAGCATGATGAGTTTTGAACTGCCA ATCATGTATACAGTAAATTTGGTCAGATTTGATGGAACCATTCATCCAGCTATTCATAACTTGTTGAAACCTTACAAGCTAAGGGACTCAAACATAGTCT TGAATAAGATGGCAGTACCACACGGAAGCATTAGAAGCTGGCCCACTGTAAGAGAGTTTAAGTACACTGGCGTGCGGATTGATGCACCAGAGGATGTGCG CGTTCCATTTTATGCGCGAGACATACCAGATAAGTTGCATAAAGAAATTTATGAAGCTTGTTGCAAATACAAGGGTGATGCTATGTTCAGTAAACTGAAT GTAGTCAATGCGTGCAAGATAGCATACACTCTACAAACAGATCCTTCTTCAATACAAAGAACTATAAAGATTCTTGATGAACTGATTGCTCGCGAGCAAC AGAAGAGAGAGTATTTCCAAAATGTAGCAAACACCTCATGTGCTGGTTCTAGTTATTCTTTGGCCAACATTGTTAATGCTATCAGAGCAAGAAGCACAAG TGACTATACCCAGGAGAACTTGAGTGTGCTACATAGCGCCAGATCACAATTAATGGAGTTCAAGAACATAAACAGTGACTTCTCAAACCTATCAACTCTG AGTGAGTTTGGAGCTCTTGAATGTTTACAGTTTGAATCATTGCAAGGGGTAAGCAAACACCTACAACTGAAGGGACATTGGAACAAGCCAGTTCTAGTCC AGGATTTCCTAATTGCAGCAGGAGTGCTCGGAGGAGGTTGTTGGATGCTTTATCAGTACTTCAAGCAAGAAACGGGAAAAGAATTCATATTCCAAGGAAA GAACAAAAGAACAAAGCAGAAACTGAGATTTCGAGATGCCAGGGATATGAAAAATCGTGTGGAGGTCTATGCGGATGAAGGGACCATAGTTGAAAACTTT GGTAGCAAATACACAAAGAAAGGAAAAGTGAAGGGTACTACAGTTGGCATGGGCACAAAAACCAGGAAATTCACAAATATGTATGGTTTTGATCCAACTG AGTATTCTTTTGCTAGATACCTCGACCCCATCACAGGTGAAACTCTAGATGAACAGCCCATAACAAACTTAGACCTTGTTGCTGAACACTTCAAAGAGCA GAGAGTGAAGTACTTGGAAAATGATATCTTGGATTCGCAACACTTCACTTCAAGCCCTAGAGTTGAAGCATACTTCGTCAAGGATGCGGGACAAAAAGTT TTGAAGGTTGACTTAACACCACACAAACCTTTACTTTACAGTGAAAAGTTTGGAAACATAATGGGCTACCCTGAGAGAGAAGGTGAATTGAGACAGACTG GCACAGCTGAATTTGTTGATTACAAGGAGCTACCCAAACCAAAAGAAACTGCAGACTTTGACTTTGAGAGTCTTAGTAAAATAGGAGGGTTACGAGACTA CAATCCAATAGCTTCTAATGTCTGCTTGTTAGAGAATGAATCAGCAGAGCACTGTGATGAGATATTTGGTATTGGGTATGGAAACGTGATCATAACAAAT CAACATTTGTTTAGACACAACAATGGAGAGCTAACCATTAAATCCAAACATGGAACCTTCAAGTGTAAAAACACTTGCGCACTTAAGTTGTTACCAATAG ATGGCCATGATCTACTTCTTATTCAAATGCCAAAGGATTTCCCCGTGTTTCCACAGAAACTTAGGTTCAGGGAACCAACGCATGAGGATAAGATAGTTCT TGTGAGTACGAACTTCCAGGAGAAGAGTTTTTCAAGTGTGGTGTCAGAATCCAGCAACATATCGAGAGTCAAGAAAGCTAATTTCTTCAAACATTGGATC TCAACAGTGGCCGGACAATGTGGCAATCCTATGGTTTCTACCAAGGACGGATTCATAGTAGGGATACATAGCTTGACCGCGATTTCAGGCGACCTCAATG TGTTCACATCCATACCACCAAACTTTGAGGATGAAGTGCTGAAGCAAATGAACAAAAAGAACTGGTGTCGTGGCTGGAAGTTGAATACATCACAAATTGG ATGGGATGGAATTAAAATTGTAGATGATCAACCAAAAGATCCATTTCCAGTTTCAAAAATGGCAGGATTGCTAAATGACTTACAATTGAGTTTCCAGAGT GCAAAGAATACAAAGTGGCTAATGGAACGAGCCCATGGAAACATAAAGGCAGTTGCTCAGGCCCCCAGCGCTCTTGTCACCAAGCATGTGGTAAAAGGAA AGTGTAGTCTGTTTGAAGTTTACCTAACAACAGACGATGAAGCAGAAAAATTCTTTCGACCGTTGATGGGTGCATATCAAAAGAGCAGATTAAACAAGGA AGCATATGTGAAAGATTTGATGAAGTATGCGACTCCAATAGAGATTGGTCTTGTCGATACAAGGTGCTTCGAGAGGTGTTTTGAGAAAGTGCAACAGATG CTGGAACTAAAGGGTTTTAGCAAATGCAACTACATTACTTATGGACCAGACATTTTGAATGCTCTCAATATGAAGGCAGCTATGGGTGCTTTGTACTCAG GAAAGAAAAAGGACCACTTCTCGGAAATCAGTGAAGAGAGATTTGACAACATTTTGCAAGCAAGCTGTGAGAGATTATACAATGGCAAAATGGGTGTGTG GAATGGATCACTTAAAGCCGAGTTAAGACCACAAGAGAAGGTGCTTGCAAACAAAACTCGATCATTTACAGCAGCACCCATTGACACACTCTTGGCTGGC AAGGTTTGTGTAGATGATTTCAACAATAAGTTTTATAGTCTACACTTGAAAATCCCATCTACAGTTGGAATAACAAAATTTTATGGTGGATGGAATCGGT TGTTGGATTCACTACCAGATGGATGGGTGTATTGTGATGCTGATGGTTCTCAATTTGACAGCTCACTCACTCCATACCTTTTGAATGCCGTTCTTGAAAT GCGATTGAGATTTATGGAAGAATGGGACTTGGGTGAACAGATGTTGAAAAATCTCTACACAGAGATTGTGTACACACCCATACTAACTCCAGATGGAACG ATAGTCAAGAAGTTTAAAGGGAATAACAGCGGGCAGCCATCTACAGTGGTTGACAACACACTCATGGTGATCATGGCAGTCTACTATGCAGCGGAGAAAC TTGGAATTGAGGGGCGCCTTGAAGACACACTTGTTTTCTTTGCCAATGGCGACGACTTGCTAATTGCCATTAAACCGGAGTGTGAATCATACCTTGACAA ATTTGAAGGTCTATTTAGTGAGTTGGGGCTAAAGTATGATTTCAACAGCAGAACAAAGGAAAAAGGTGATTTGTGGTTCATGTCACACAGAGGCGTTCAG ATAGATGGAATGTGGATTCCGAAATTGGAAGAGGAACGCATCGTTTCAATTCTGGAGTGGGATAGAGCTTTACAACCAGAGCATAGGCTTGAGGCTATAT GTGCATCAATGATTGAGGCATGGGGCTATCCAGCTCTTTTGAACCACATAAGAAAGTTCTACCTCTGGGTATTAAGCCAAGCACCATATAATCAGTTGAG TGCTGAAGGTAAGGCACCATATATTTCAGAGGTTGCACTCAAGCATCTATACACTGAAGAGAAGGTCACACCAGCTGAATTAGAAAGATACAGTATCGCA CTTATTGATTGTTCCGAAACAGAAAGCGATGAAGTGATAGAGTGTCGTTTCCAGTCCGATCAAGAGAAGCTCAATGCTGGTGAAAAGAAGAAGGACAAAG ATAAGAAAGTTGACGAAAATCCTCCAAGGGATTCTGAGGGACAAAGCAGCAGGCAAATAGTACCTGACAGAGACGTCAATGCGGGAACTGTGGGAACATT TTCAGTTCCTAGGCTCAAAAAGATAGCGGGGAAGTTGAACATTCCAAAAATTGGTGGAAAAGTAGTTCTCAACTTAGACCACCTGTTAGATTACAATCCA CCACAAGATGACATCTCAAATACCATTGCAACACAAGCACAATTTGAAGCATGGTATAATGGTGTTAAACAAGCATATGAAGTTGATGATTCACAGATGG GCATCATACTAAATGGATTAATGGTGTGGTGTATAGAGAACGGCACGTCAGGAGATTTGCAAGGTGAATGGACAATGATGGATGGCGAAGAGCAGGTAAC ATATCCGCTCAAACCAATCCTAGATAATGCGAAGCCAACATTCCGCCAGATAATGTCCCATTTCTCACAAGTCGCAGAAGCTTACATAGAGAAAAGGAAT GCGACAGAGAGGTATATGCCACGGTATGGCCTCCAGAGGAACTTAACTGACTACGGTTTGGCTAGATATGCCTTTGACTTCTACCGACTGACTTCTAAGA CTCCTGTGCGTGCTCGAGAGGCACATATGCAAATGAAAGCAGCAGCAGTTAGAGGCAGGTCAAACCGATTATTTGGTCTTGATGGCAATGTTGGAACAGA CGAGGAGAACACGGAAAGACACACAGCAGGAGATGTTAACCGTGATATGCACACCATGCTTGGTGTTCGTATTTAGAGTATCCGTCTTTAAATTCTCTAT AATATGGCGTTACATTACTTAATACTATGTATTAGTGAGGTTTTACCTCCAGCATTTTAAATTCAGTATGTGTATCATTCTCTCTACTCTGACAAGGTAA GCAGTTAGTGAGGTTGCCTCGTGTGAGCTTGATCTTTGTAGAGCGAGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183244; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_518748
| Blastp | Genome polyprotein from Potyvirus with 90.87% of identity |
|---|---|
| Blastx | Genome polyprotein from Potyvirus with 90.87% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003524885.1) |
| Pfam | Potyvirus P1 protease (PF01577.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |