Ll_transcript_517175

• Id Trinity: TRINITY_DN51258_c1_g2_i9
• Name Transcript: Ll_transcript_517175
• Sequence: TGGGCCTCAACAATCCACTACAGAGAGATGCGTTTGTCACTCTCACTATCACACTACGGCAAACCCTAATCCACTTCCTTTATTCCCTTTCTTCATCTCC TCGAGTTACGGTCAATTCCCTGCACCCAACTTTCACCAATCATGGCCACTCACGACTACGATGACGCACGCGCCGTCGCAACCGGTCCCGGCTACGACGA ACAATTAGGTTACGACCCTAACTTCGTTCCAGATTCCGTGAAATCCTTCGTTGTCCACCTCTACCGTCACATCCGTGAGAAAAACGTGTACGAGATTCAC CAGATGTATGAAACCTCATTCCACACTCTCTCCGATCGTTTATTCAAGGACACGCCGTGGCCCTCGGTGGATGCGGTGGCGCATTACGTTGATAACGATC ATGTGTTTTGCTTGCTGTATAAGGAGATGTGGTTTCGCCACTTATATGCTGGGCTAACTCCTACGCTACGACAGCGTATTGATTCGTGGGATAATTATTG TTCACTGTTTCAGGTTGTGCTACATGGTGTTGTTAATATGCAGCTTCCGAATCAGTGGCTTTGGGATATGGTGGATGAATTTGTTTACCAGTTTCAGAGT TTCTGCCAATACCGTGCCAAGATGAAGAACAAAACTGAACAGGAGATTGCTCTCTTGAGACAGTTTGACCAGGCATGGAGTGTTTATGGTGTACTCAACT TTTTGCAAGCGCTGGTGGAGAAATCCAATATTATTCAGATTCTGGAGAATGAGAAGGAAGGGCTGGAACAGTTTACTGCCACGGATGGTTATGATTACAA TGGAGGGAGCAACGTGTTAAAGGTTTTGGGGTATTTTGGCATGGTTGGATTGCTGCGAGTGCATTGTCTTTTGGGAGATTATCATACCGGTCTCAAGTGC CTTCAGCCAATTGATATTAGCCAACAGGGTGTTTACACCCTAGTTATTGGCAGCCACATTACTACCATTTATCACTATGGTTTTGCCAATCTTATGCTGC GCAGGTGCGGTTATATATCCCTTGGCTTTTAATATTGGATGACAATGACTAGTTAATTACTTTTTTTGCTTGCTTGTTTTTTGTGGTGGCCTTAAAACAA TATTGGTTTGCGTTTTACCTGTGTTCCTCTTCTCCTTCATAATTGAAGGTAATGATTATTCTATTATCTTTTCCTAGGAAAAGAAAACTGCCAACTGAAC TGTGTACGTGTGTGGTGAGGCCACCTTTTGCCTTGTATGCATTACTACTTGTTGACTGATGTTTCACGGATATAGCTTGACATTGTAGGAGTATTTATAG TGGATCATCTTAGAATACAACATGCAAGCATGGTCTGAGATTTCTGTATCTTGTATTTCAGGGTTTTTACTTTATAATACACAATTTAGCTATTAAATTT GTTAAAAAAATAGAACTGGACCGGTACTTAAACCTTGGTTGTATTTTCGTCCCTCTACGACCTTCAAAGTTTCAAATGATTTGATATCCAAGAAAATATA TCCTCCCTTCGGTCATTCTTATAACGGTCATTATAAATATAGTAAGTTGAAAAATCCTGTTTGACTTTTTAGTTTCTCTGTTCAAACAAAAGGTGTTTTG ACATCATTGCTTACTCTCATTATCTTAGTACAATACTTGACCCCTTGCTTTTTTGTACAGATATGTTGAAGCAATTCGTGAATTCAACAAGATTCTATTA TACATCTATAAGACAAAGCAGTATCATCAAAAATCTCCCCAATATGAGCAGATACTGAAGAAGAATGAACAAATGTATGCCTTGCTGGCAATTTGTCTTT CACTCTGCCCCCAAAGCAGACTTGTCGATGAAACTGTGAACTCTCAGTTGCGAGAGAAGTATGGTGAAAAGATGATCAGAATGCAAAGATATGATGATGA GGCATTTGCCATCTATGATGAGCTCTTTTCGTATGCATGTCCAAAGTTTATTACCCCTTCAGCACCTAGCTTTGAGGAACCTCTATTGAACTACAATCAG GATGCTTAGAGACTTCAATTGAAACTGTTCCATTACGAAGCAAAGCAACAGCAATTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCGACAATCT CCCTTACAAAACTTGCAAGTTACGTGGAAGTCGATGAACTTACCTTAAGGACTATCTTGACAACATACAAGCATAAGACACATGCTGTTAATAGTGATGG AAAAGTTATCTCCAATGCTGATATCAATTTTTATATTAATGATGATATTGTTCACGTTGCAGAGTCCAAGCCTGCCAAACAGTACGGGGATTACTTCCTG CGTCAGGTTGTCAAGCTTGAAGGAGTGATCAACGAAGTGGACACTATAAAGCTGTATTAAGTTTTTGCCTTTCTCAATGCACTTGTTATTATACATGTTG GATTCCCCTGGCCAGAGCTTTCCCTGTGGTAGAGAATGTAGTTAGCTTTTTACAAATTAATACTAATTTGGTCCACTCAACGTGATTTTATTTAAAGAAA TAACATCCATTTTTATTGTATTAAAGTTCATAATTCTTTAGGTGGGTTGCATATTGTTGGTCATGGATCACATGGTTTTCTGATCCACAGCTAAGATAAA TTGTTCAGTGCTTATTTTCTGTTACCTGTCTAGTTCATGACTCTAGAAAACCAATTTCAATATCCTTATTGGTATACAGGAAATGAAACACTCATCTCAT AACACTATTGTTGCTCGAATATATTGGGGAAAACAAACTCTTGTCAGTTTTACAAAAAAACAAGAATAAGATGTTATCTCACAAGGTGTGACCGGCTACA TGAATTGAACGATGTTATTTATTTGATCATATATTATATTATTGAGAAAATATTGATCTAAGTTGTGTG
• Tissue: pods
• Gene name: LI_gene_183535;
• Additional information: details;

Expression of Ll_transcript_517175

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.3
• PS3: 0.2
• PW1: 0
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517175

• Blastp: Eukaryotic translation initiation factor 3 subunit L from Danio with 42.04% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit L from Danio with 41.69% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XPJT)
• Kegg: Link to kegg annotations (406402)
• CantataDB: Link to cantataDB annotations (CNT0002691)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415373.1)
• Pfam: RNA polymerase I-associated factor PAF67 (PF10255.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;