Ll_transcript_519168

Id TrinityTRINITY_DN51294_c3_g1_i16
Name TranscriptLl_transcript_519168
SequenceCATATTACCATGACACTACACTGCTTCAATTTCCCTTTTTTTAAATAAATAAATAAAAACTTCGAATCCTTTTTACACAATAACGAAAATGATTAAAAAA ATCACGACGAAGCGTGTACCTTAAAGCACGATGGATATTTATCGATGAAGGAGAAGAGAACAAAAATGGATTTGAAGATTTGGTAGTGAAGCTTTTGGAA CGATTAGCGAGGGTCCTCGATGCTACCCTCGCTATTGATTTACACACCGTAGAAGAAGCCATTGTTCTAACTCACATTTCCTTCAACCCCTTAAACCCTA ACATTTCACAATTGGGCCTGGCCCATTTCAAAAACCCAAAATAAACCGGTTTATAAATCCGACCCGGTTTATAACGAACTGAGACGAGTGAAGTGAAAAA CCTACTGCATCGTTGAGCAGTGGCGAAAGAGAAAAGGGGAAAATGGCAGAAGAAGCAATTCTAGGTTATTTGGAACACAACGATGAGATTAAAGATTCAG GAGAATTCGCAGGTGAACGTAACATCGATCATAGTGAGATCGTGAATGTGATAAAGAGTCTCTATGGTTTTCGATACGTGGATGTTGAGGATATTAAAAG GGAATCATGGGTTTTAACCGATGAGGGGAATATATATGCTGAATCAGGGTCACCAGAAGTGCAATTGTTTTTGGCGGTACCAGAAGAGGGTATTGTGAAA GATGAACTTTTGAAGAAAGTGGGTCCTTCTCTCTTCAAGATTGGTTGTGCCCAAGCTGCTAAGAACAAATGGCTTGATTTGGGTAAACAACTTATCACTA GAAAGCTTCAACATGTTGATGACAAGGTTAAACACCTGCTTCTTCAAATACAACAAGGACAGGGCATTGGTTCAGATGATATCAAGGCACTCAAAGCACG AAAGCTTATTGTTCCACAGTAATAATAATTTGACTCGGTTGTGCTAATGAGTTTAAAGATATACTTGAATGTCCTGTCAATGACATGACCTTTCTTTTAA TATTGGGAAAATTCTTGATATTTCATGATACACAGGACGTGGAAGGGTTACTCGGTGAAAAAGGGTCCTAACTATGCACCAAAAAGAAAGCAGGTTGTCA CTGATTTAACTCGGGATAATTTTCAGAGTGGTGAGTGGAAGGAGTTAGAGTTCAAAGAGTACAATTACAGTGCTAAAGGTCAGCCTCTTGAGGGTGGTCA TCTTCATCCACTTCTGAAGGTACGGTCTCAACTGAAGCAGATTTTCCTCTGCATGGGGTTTGAGGAGATGCCGACAAATAATTTCGTGGAGAGTAGCTTC TGGAATTTTGATGCCTTGTTCCAGCCCCAACAACACCCTGCTCGTGATTCCCATGACACTTTCTTTTTGGAAACTCCGTCAACAACGAACATTCTCCCAG AAGATTATGTTCAGAGGGTGAAGCAAGTGCACGAATCTGGTGGTTATGGATCTAGGGGATATGCATACGACTGGAAAAGAGAGGAAGCAAATAAAAACCT TCTGCGAACTCACACAACTGCTGTTTCCTCCAGAATGCTTTACCAGCTAGCAAAGAAACCTTTTTCTCCAAAGAAATATTTCTCTATAGATCGTGTTTTC AGAAATGAAGCAGTTGATCGAACTCATCTTGCTGAGTTCCACCAGATAGAAGGCCTTGTGTGTGATCGAGGACTCACTCTCTGTGACTTAATCGGAGTAT TGCATGATTTCTTCTCACGCATGGGCATGACCAAGTTGAAGTTCAAACCAGCATATAACCCTTACACTGAACCTAGCATGGAGATTTTCAGTTATCATGA AGGCTTTAAAAAATGGGTAGAGGTGGGAAACTCTGGCATGTTCAGACCTGAAATGTTGCAGCCAATGGGTCTTCCTGAAGATGTTCAAGTTATTGCATGG GGTCTTTCCCTTGAAAGACCAACTATGATACTATATGGGATAGATAACATCAGAGATCTCTTTGGACACAAGGTGGATTTAGGACTTATGAAGAAAAATC CAATTTGTCGTCTTGGAATTGAATAAAGAATAATCTATTGGCTTTCTTTTGTTTTAAAAATTACTATATCATTATTTTTTTGGAATTCTGGAAGGTCAAA TAATACTGTAGATTATTTCAATTCTGTATGAAGAATTTTGATATGGAAGTTACCTTTTTATTGGAAGGATTATAAACCTGGAATAGTATTTTTCTTGTTT TGGAAAACAGTCATGATTAAGAAAGTTGCCCCATTCCATTGCCCAAGAGTGTCATAAGTTGTGATTTTGTGACAATTCCTTCACACACAAAAATGTAGCT AAAGATGCTTGTTAGACAATGGCATTTTCATGAAACACTCAAAA BLAST
Tissuepods
Gene nameLI_gene_183835; 
Additional informationdetails; 

Expression of Ll_transcript_519168

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_519168

BlastpPhenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 84.64% of identity
BlastxPhenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 73.81% of identity
EggnogphenylalanyL-tRNA synthetase, alpha subunit(COG0016)
KeggLink to kegg annotations (AT4G39280)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019448494.1)
PfamtRNA synthetases class II core domain (F) (PF01409.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;