Ll_transcript_288928

• Id Trinity: TRINITY_DN51331_c0_g2_i15
• Name Transcript: Ll_transcript_288928
• Sequence: AAGAACTTCATGACACTGCCCAACATCAAGGTTCCTCTCATTCTTGGTGTCTGGGGAGGGAAAGGTCAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCG CCAAGATGGGAATCAAGTGAGTTGTTGCTATGCTAGTTCCCCTAATGAACTATTTAGACATAAAAATATTCATGAGATTTTTTATAATAGCTAGTTGTTG ATAATTGACATACTATACTGCTAAACAACACATCAGTTAAACATATTAGAAACTAATTCCAAATTAAAAGTCTCTTTGGTGCATTTCAATTCAATACGTA ACATAATTTTGGTGCACCAAAAATACACGATGGAACAGGACAAAAATGATATTTTTTCTACTCGTTTCGGATCTACTCCACACCTTCTCGTCGAACCAAA ATGTTATACTTTCAAACTTTTGTCCCGCTCTTTTATGTTTACAGAAACACCAGTGTCAAACAAAGAAATAACAACCATATTCTCTGTTCCATCATGTTCT GAAGTTCCTACCAAACACTAGTGTTCACAGGCTTCTCCAAATTTGATATCTTCCTTGAATATATGTATCGCTACTAACTTTCTAGTGCCTATGTTGTTGT AATTACATAACAGCCCTATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATAAGGCAAAGATACCGTGAAGCTGC AGATATAATAAGGAAGGGAAAGATGTGTGCCCTCTTCATCAATGATCTTGATGCAGGAGCTGGCCGTATGGGTGGAACCACACAGTACACTGTGAACAAC CAGATGGTGAATGCTACACTCATGAACATTGCTGATAATCCAACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCGCGTGTGCCTATCA TTGTCACTGGTAACGATTTCTCAACATTGTACGCTCCTCTCATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCACCTACTAGGGAAGATCGCATTGG TGTGTGCATAGGAATCTTCCGCAGTGACAATGTTCCTAAAGAGGATGTTGTCAAGATTGTTGACACCTTCCCTGGTCAATCCATTGATTTCTTTGGTGCA CTCAGGGCCAGAGTATATGACGACGAAGTGAGGAAGTGGATTGGTACTGTTGGTGTTGACGGCATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGACCTC CAACCTTTGAGCAGCCCAAGATAACTGTGGAAAAGCTCTTAGAGTATGGTTTTATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTCCAACTTGCAGA CAAGTACTTGAATGAGGCTGCTCTTGGTGATGCTAACCAAGATTCTATCAAGAGAGGATCTTTCTATGGCAAGGCAGCACAGCAAATAAATGTTCCCGTT CCCGAAGGTTGTACTGATCCAAATGCGAAAAACTTTGACCCTACTGCTAGAAGTGATGACGGATCCTGCTTATACACATTCTAAGCATATCAGGTGAAAG GAGAAGATGTTAAGATGAGAGATAACTGAATAAGTTTTATTATATTGTTCATCCTCTATAATTTTGAGTTATGTTGTGAACAATGTTTAATGGATTTGGT CCTTTGTCTTGTGTCTACCTTCCAGTCATGATATTTGTATCTCTTGTGTTTAATTCCTGGATACTCCATTCTTAAACGTTTTGTAATCCTACTGTAAATT AGACATTGAGGTTTTTGGTCTATCAACATCTTATAATAAGGAGCCTTTTCCATCCTAAAA
• Tissue: pods
• Gene name: LI_gene_184115;
• Additional information: details;

Expression of Ll_transcript_288928

FPKM

• PAB: 0.4
• PNAB: 1.1
• PS1: 0.2
• PS2: 0.4
• PS3: 0
• PW1: 0.2
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288928

• Blastp: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Oryza sativa with 87.15% of identity
• Blastx: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Oryza sativa with 76.32% of identity
• Eggnog: 26S protease regulatory subunit(COG1222)
• Kegg: Link to kegg annotations (4351224)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461023.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;