Ll_transcript_289174

• Id Trinity: TRINITY_DN51379_c0_g1_i8
• Name Transcript: Ll_transcript_289174
• Sequence: CTCCATTTTCTCTCTCTCTCATTTCAATTTCTCCATTTTCTCTCTCTCTCAAACTTCATCTAGTAGAAGAAACAAAACAAGCTCAAAACTGCTTCAATTC TCGTCACTCTTCACGTTTTTGCGATGCACCGCGTGGTTAGTGCGGGTAACACAAGCAACAACAATTCAACTCGCCCTCGTAAGGAGAAGAGGTTAACATA CATTTTGAATGATCCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTCACT GGGAGCCGTGATGGCAAGCTAAAGCGTTGGGCACTAGCTGACGATGTAGCAACATGCTCTGCAACCTTTGAGTCTCATGTGAATTGGGTTAATGATGCTG TTATTGTTGGTGATAATACACTTGTTTCGTGTTCTTCAGATACGACCGTTAAGACATGGAATGCTTTGTCGAATGGAACATGTACTAGGACGCTCCACCA ACACTCTGATTATGTTACTTGTCTCGCAGCAGCAGGAAAAAATAGCAATATTGTCGCCTCTGGTGGCCTTGGCGGGGAGGTTTTTATATGGGATGTTGAT GCTGCGCTTGCTCCGGTTTCTAAGTGTAATGATGCTACGGTTGATGATTCTTCGAATGGTACGAAGGGTTCTGGCAACTTACATACTGTCGGTTCAAGCA GCAATATATGTGTGCACACTACTCAAACAGAAGGTTACATTCCAATTGCTGCCAAAGGTCATAAGGAGTCGGTTTATGCATTGGCAATTAATGAAGGTGG GACAGTTCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACTAGATCTGGATCGAAGACTCTGAAGCTAAAAGGGCATACAGAGAACATC AGGGCGCTGCTGCTGGATTCTACTGGAAGGTATTGTTTATCCGGATCTTCGGACTCCATGATAAGGCTGTGGGATATCGGTCAGCAGAGATGTGTGCATT CTTATGCAGTTCATACAGATTCTGTATGGGCGCTTGCCAGCACCCCATCATTTAGTCATGTTTATAGTGGTGGGAGAGACTTTTCACTATACTTGACAGA CCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACTGGCGAGCACCCTATTGTTAAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCAACAGATTCT TCAGTTCACAGATGGCCTGCTGAAGGATACAATCCTCAGAAGATTTTCCAAAGAGGCAATTCTTTTATAGCCGGAAACTTGTCTTTTTCAAGAGCAAGGG TGTCGGTGGAAGGATCTAGTCCTGTTCCTGTATATAAAGAACCTACCTTGACTATCGCGGGCATCCCTGCAATAATGAAATATGAAGTTTTAAATAATAA GAGACATGTATTGACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGTCGTAGTTGAAGATTATGGAAAGGTTTCATTTGAGGAG AAAAAGGAAGAGCTCTTTGAGATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAAGTTTGTCTATCCATTTGGACACTCCCCAATGCT TTTGTGCAGAGATGTATTCAGCAGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGTTTGGAAACCCTTAAAGGGATCTTCACTCA TTGGTTGATAAAAAGAAAGCAAAGAATGGGATCCCCAGCTCCAGCTAATGGGGAATTGTTATCTGGAAAGGATATTGCTGCTAGAAGTCTTGCCCATTCA AGAACTGCCGTTGATGGTATTTCTGAGAATGACGTTATGGTTTATCCTCCGTTTGAATTTCCAGTCACTTCCCTTCCTTCCATTATTACGGAGGGCACTG AAGGAGGTCAATGGAGAAAAAGAGTTGCAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGATGGTGTCTGGACTGCCTTTTGAATAACCGGTT ACCTTCCAGAGAAGCCACTAAATGCAGTTTCTATTTGCATCCATGTGAAGGCTCTACAGTCCAGATCCTCACACAAGGCAAGCTAAGTGCCCCACGTATA TTAAGAACTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTCTGGATAGTGTAGCCAATGGAGGTTTTGCCCCTGTACTTGGTG CATCACAGTTACAGCATCAAGTAGTTGGGGATGGATCTTTCCAATCGGGATTTAAGTCTTGGCAAAAGCGTAAACCTTCTATTGAAATATTGTGCAACAA TCAGGTTTTGCCTCCTGATATGAGCTTAGCCACAGTGAAAACTTATATATGGAAGAAAAATGAAGACCTGGTTCTACATTACAGAGTGGTTCAAGGCAGG TGACTACAAATTGCATATGCATCAGAGGATACTTCTGAGCATTTAATCTTCTTGGGTTGCCTGCATTCAACGGTGGCGCCGTAAGATTTCTGTAAATTCC GAGCTCTCATTTACCATGAATTTTTTCTCCAGACTTGCTTGGACAGTTTTTTTTCCCTATAGAAGAGAGCTGTTACTATAAATTTTGAATAATTATCTAG CTGGTGTGCATACTTTTACTTGATATGATGGAGTCATTGATGTTCTGCATCTAGAAATTGACTGTTGAGAATTAGTGGGGATCATAATATTGGGGTGTTC TTCATGAACCTGTGAGTTAATTTAGAGATGACAAAGAAAATATTGTACATTTGAATTTGAATTGTGAGTTAAATAAATACATAGCCATTGAATTATTTAA CCATTAGTAATGACATTATTCGATTCATGTAGCCGACCACATCTAGTGGAACTAAGACGTGAATGTTGGTTGTATTTAATCATTGGCAATATTATTCTCA TTTTTTTTTCAAATTAAAA
• Tissue: pods
• Gene name: LI_gene_184498;
• Additional information: details;

Expression of Ll_transcript_289174

FPKM

• PAB: 11.5
• PNAB: 7.4
• PS1: 6.5
• PS2: 7.3
• PS3: 10.1
• PW1: 6
• PW2: 7.4
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289174

• Blastp: WD repeat-containing protein 48 from Gallus with 35.32% of identity
• Blastx: WD repeat-containing protein 48 from Gallus with 35.15% of identity
• Eggnog: WD repeat domain 48(ENOG410XRJ5)
• Kegg: Link to kegg annotations (420427)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419683.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;