Ll_transcript_289874

• Id Trinity: TRINITY_DN51386_c4_g1_i4
• Name Transcript: Ll_transcript_289874
• Sequence: GTTTTGTTGAGTGTTATAATTGTTATTATTTTCACACTAAAAGTAAAATTGGGTTAAAAAAAAGAAGTTACTAGTCCTTAGTTACACACAAGTGTGCGTG CCTTTTAAAGGTTAAAGTCGATGAGATGCGCCATTTGTTTTCTGTTTGTGTCACTAAGCTGTGACCACAGTGCTTCCTCCTCTCTCCTCTTCCTTTTATT CTGTTAGGGTTTTCTCACTACATTCATTTCAGTTCCTATTTATGCGTTTTTTCTATTTCGAATTCGACTCTATTAAACTATTCACTATCAGATCTCAATT TCTCCACAGCTAGCTCGCCAATTCGAAACACATCGATAGTTTCGTGAGTTACGAAACCCCGGTTAACATAAACAAAATATCTATGGCTGATGAACCACTA TATCCGATAGCAGTTCTTATCGAGGAGCTGAAAAATGATGACATCCAGCTGCGGTTAAACTCGATTCGGAGGCTATCAACGATTGCACGTGCTCTTGGGG AGGAGCGAACTCGTAGGGAGTTAATTCCATTCTTGATTGAAAATAATGACGACGAGGATGAGGTACTTCTTGCAATGGCAGAAGAGTTGGGAGTGTTCGT TCCATATGTTGGGGGAGTGGAACATGCCAGTGTTTTGCTTCCACCATTGGAAAATCTTTGTACTGTTGAGGAAACCTGTGTGAGAGATAAAGCTGTGGAG TCACTTTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGAATATTTCATCCCATTGGTGAAGAGATTAGCAGCAGGTGAATGGTTTACTGCCC GAGTCTCTGCATGTGGATTATTTCATATTGTGTATGCAAGTGCACCAGAAACGTCAAAGACAGAGTTGAGATCAATATACAGTCAGTTATGTCAAGATGA TATGCCTATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAAATTTGCCGCAACTGTTGAGTATGCTCATTTGAAAGCAGACGTCATGTCGATTTTTGAC GATCTTACTCAGGATGATCAAGATTCTGTTAGATTGTTGGCTGTGGAGGGCTGTGCTGCACTTGGAAAGCTGTTGGAGCCACAAGATTGTGCTGCACATA TACTCCCAGTTATTGTTAACTTTTCCCAGGATAAGTCTTGGCGTGTCCGTTACATGGTTGCAAATCAGTTGTATGAGCTGTGTGAAGCTGTGGGACCTGA GCCTACCAGAACGGAATTGGTCCCTGCCTACGTGCGGTTGCTTCGAGACAATGAGGCTGAAGTACGCATAGCAGCTGCTGGAAAAGTGACCAAGTTTTGC CGGATTTTAAATCCTGACCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTATCATCAGATTCTTCACAGCATGTCCGCTCTGCATTGGCTTCAG TAATAATGGGAATGGCTCCAGTGTTAGGAAAGGTATAAATGTCAAATAGCAGTTTATGCTGTCAGTGTGCACTAGACAAGAATATGCGTTGTGTCATATT TTACTTGGTGAAATCTGTTGGGTGTCCTACAAATAATTCATTTTTTATCTTTCAGTGCATTGCTCATAACAAAGTCCATTTGTTTTTATTTTTCCCACTC TCTAAACCGCGTTCAAGACATCATTTGGAACTTTAGGCCGTAAAGTATGTTTCACAGCTTCCTCAAATGAATCACCTGATTGTGATGTATAGCCGTATAG GTAATTAAAACAGTCAACAACTATGTACTCAAATATGTCCTTTCAAAAGTAGGGTAGGGCATGTGTCATACTCATACATGCACCAGGGATACCTGTACAG AAGTTGACCAGATTCACCTTTAAAATTCCCACCTCCCCCTGTCCTCCCAGCCTGTATAATGAAGGGAAACAAGAGTAATTATTGCCCAATATAGGTTTAG TGCAGTATCCAGGTCTTTTACGTTGGCAAAGTCATAAACTATGCAAATGTTATCAATGCCTTTCAGGTCTTTTGGTTAGGATTTTGTATATTTCTATGCT TGTCTGGTTACTTTGTGGTAACTGACTTCTGCATTTTGCTGTTATGAAGACTTTTGTTGAATTTACTGGGTTGTGATAAATTAATTCTGCTATATGGAGT AATTTTTGTGGTGTCACCACTTTTAACCCTTTTTTATTCCAAGAAAGTCAAGACTTATATTGGGATTTACCAACTTCTTCATTTTTGCAAATAAAATAAA GGGGAGGGATCAAGTTACTCCAAGAGTAACTCTTTTACACTTACTCTTTAT
• Tissue: pods
• Gene name: LI_gene_184556;
• Additional information: details;

Expression of Ll_transcript_289874

FPKM

• PAB: 9.3
• PNAB: 24.9
• PS1: 24.7
• PS2: 14.4
• PS3: 19.2
• PW1: 17.1
• PW2: 14.3
• PW3: 9.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289874

• Blastp: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform from Arabidopsis with 90.57% of identity
• Blastx: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform from Arabidopsis with 90.34% of identity
• Eggnog: (Regulatory) subunit(ENOG410XQVI)
• Kegg: Link to kegg annotations (AT3G25800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441383.1)
• Pfam: HEAT repeat (PF02985.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;