Ll_transcript_380341

• Id Trinity: TRINITY_DN51418_c0_g1_i8
• Name Transcript: Ll_transcript_380341
• Sequence: TTTCTCTTCTCTTGATTTGGAGCGGTCCTATATTTCTTTCTTAACTAATTACCATGTATTTGAAATAAAATACCATATATATATGTATATTAATTTAAAG ATAGATAGATAGACACACATGCACACAGTGATTTCCATCTAACCGAAAATCCACTTACCCATTGCTTGTCTCAGAGCTTTTCTAGGCTCATTAGTTTTAT CTCATGGCCATTGTCATTGTCATTGCCAGTAACTATCTCCCCAAATCCCAGACGACTAGGATTGGAAGGTGACATATCTCTAAATCTCCAAGCTTTTTAT TTATCAGAAAACTCTTCAAGCTTTTGACTAGTCTTTCTCTGTAGACTGTTATTATCATGTTTTTTTTTGCTTTTCAATCTTGACTTTCATGTTTATTTGT TTTAATACCGTCTCAGTAACCAGTACATACATATTTATGAGTAAATCATATATAGGTGAGGCTGTGTTTGTAGATGACATTCCATCACCTACAAATTGCT TATATGGAGCATATATTTATAGTGAAAAGCCTTTAGCAAGGATAAGGAATATAAAACTCAGGCCTGAGTTGCAATCGGATGGAGTGAGGGAGGTCATTTC AACTAAAGATGTTCCCAATGGTGGGGAGAACATTGGATCTAAGAGCATATTTGGTGATGAACCTTTATTCGCAGAAGATATTGCTAAATGTGTTGGTGAA CGTCTTGCCTTTGTGGTTGCAGATACTCAGAAACTTGCAGATATGGCTGCAAACTCTGCTGTTGTCGATTATGATATCGAAAATATTGATCCACCTATTC TGTCTGTGGAAGATGCCATTGAAAGGTCTAGCTTTTTTGAAGTTCCTCCTTTTCTCTACCCAAAATATGTTGGTGATATATCAAAAGGAATGGCTAAAGC AGATCACAAGATTCTCTCTTCCGAGATGAAACTTGGGTCTCAATACTATTTCTATATGGAGACACAAACTGCACTTGCTGTACCAGATGAAGACAATTGC ATTACGGTTTATAGCTCAAGTCAGTGCCCTGAGTCTGCACATTCTATTATAGCAAGATGCCTAGGTATTCCTGAAAATAATGTTCGAGTAATTACAAGAA GGGTTGGGGGAGGTTTTGGTGGAAAAGCCATGAAATCTGTACCCGTTGCTACATCGTGTGCACTGGCAGCACACAAATTACGCCGGCCTGTAAGGATGTA TTTAAATCGAAAAACTGACATGATAATGGCTGGAGGAAGGCATCCAATGAAGATAATTTATAGCGTTGGGTATAAAAATGATGGGAAGATTACTGCATTA GAACTTCAGATATTGGTCAATGCAGGGATATATGTAGATGTAAGTGCAGTGATGCCACATAACATAGTTGGTGCACTTAAAAAGTATGACTGGGGTGCTC TATCTTTTGATATAAAGGTATGCAGAACGAATCATCCTAGTAGGTCTGCAATGAGAGGCCCTGGGGAGGTGCAGGGATCATTTATTGCTGAAGCTGTAAT AGAAAATGTTGCAGCGGCACTTTCAATTGATGCAGATTCAGTCAGAAGCATTAATCTTCACACACACAAAAGCCTTCGGTCATTCTATGAGGGTTGTTTT GGTGAACCTCATGAGTATACCTTGCCTTCTGTGTGGAATCAGTTAGCTGTTTCTGCAAAGTACGAGCAGAGAACAGAAATGGTAAAGGAGTTTAACAAGA TTAACATTTGGAAAAAAAGGGGAATTTCTCGAGTACCAGTAGTGTATCAACTGATTCTAAGACCAACCCCTGGAAAAGTAAGTATTTTATCAGACGGGTC TGTCATGGTTGAAGTTGGAGGAATTGAATTGGGTCAGGGTCTCTGGACAAAAGTGAAACAGATGGCTGCATTTGCTCTCAGTGCAATTCAATGTGATCGA AATGGTAGTCTCTTGGACAAAATACGGGTTGTACAATCTGATACTGTGAGCTTGATTCAAGGGGGATTTACTGCTGGGAGCACTACATCGGAGTCTAGCT GTGAAGCAGTTAGGCTTAGCTGCAATATCTTGGTTGAGAGGTTAAGGCCTCTCAAGGAAAAGCTTCAGGAGGAAATGGGCTCTATTGATTGGAAGACACT TATTCTGCAGGCATACATGCAAGCTGTGAACTTATCAGCATCTGCATTTTATGTACCCAGTCTTGATTCCTCGATGTACCTTAATTATGGTGCTGCATTA AGTGAGGTGGAAATAGATCTTCTAACCGGAGAAACCAGATTTTTGCAAACAGATATTATCTACGATTGTGGACAGAGTCTCAACCCTGCAGTAGATTTAG GACAGATAGAAGGAGCTTTCGTCATGGGGTTAGGATTTTTCATGCTTGAAGAATACGAAACAAATCCGGATGGTTTGGTGTTGGCAGATGGCACATGGAA CTACAAAATACCTACAGTAGACACCATACCTCAAAAATTTAATGTTCAAATAATCAACAGCGGGCATCACCAGCATCGTGTTCTCTCTTCAAAGGCTTCC GGTGAGCCACCCTTACTTTTAGCAGCTTCAGTTCACTGTGCCACTAGAGCAGCTATCAAAGAAGCCAGGAAACAGATTCTTTCCTGGAGCAACAGCAACT CAGATGATATACATGATTCAAATTTTCAGTTGGAGGTCCCTGCAACCATGCCTGTGGTTAAAGAACTCATTGGACTTGACATTGTACAAAGATACCTCAT ATGGAAAATGGGTAGGATGTAAAAGTACTCAAGATCCTGGAACATAAGAGATGCCTTTGGATTTCACATAAAGATCATATAGTGAAAGAAATATTTTGCA ATTTTTTTACATTATTCTTGATGCATAAACTACTGGTTCAGCAAGTAGTTTCTGCATCAAGAATAAGGACTAGTCTGACAGATATATTTTGCGGAAATTA TAGGGACCTCCTCTGAGATTTATATTATAATTTCAAGGGAGGTTAATATAATTTTTCCATATGTTTTTGGTGGAAAAAAGAATAAGTGAGGAATGCTGCT ACTTGGTTTAAATTTGTTCTACCTCAGTGTAACATTATTTATATGTTGATACAGCATTAATGAATTCATGCCCTTTTTCACAGTCTTCTTTTTTTCTGCA GAGAAAACTGCATATAATCATCTTTTCCAATTATAGGGTGACACTACCATTTATATGTCCAAATATATGATCTTTTTATTTAATAATCTTTATAGTAAAT ATTGTAAAAATAGCTTTGTATTAAGTCTTCT
• Tissue: pods
• Gene name: LI_gene_184795;
• Additional information: details;

Expression of Ll_transcript_380341

FPKM

• PAB: 0.4
• PNAB: 0.7
• PS1: 1.2
• PS2: 0.8
• PS3: 1.4
• PW1: 0.6
• PW2: 0.7
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380341

• Blastp: Abscisic-aldehyde oxidase from Arabidopsis with 66.53% of identity
• Blastx: Abscisic-aldehyde oxidase from Arabidopsis with 66.4% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT2G27150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455868.1)
• Pfam: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain (PF01315.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;