| Id Trinity | TRINITY_DN51446_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_380123 |
| Sequence | CACACACACCCTCTCTCCTTCTCTCTCATTCTCGATATTGGTGTGTTTGATAAAGACCATTGTAGAGCCAATAACCCGTTATTATTAATCAAAGTTTGAA GCTTTGTTTCTCACTTTCAAATTTGTTGTATACTGAGGAACTCATCAGTCATCACCTATCTAATGAAAGAGAGTGAAGGCTCTCTCTCTTTGAGAGCCAC ACACTAACCCAACAACAAAGTTAGTGTCTTTTTTTTCTTCTCACAAACTCTCTCACTTCCACTTTCTCACTATGGCTCTATCTATGCACAAAGACAATAA CAACAACATCATGGATTCAAGCAAGTATGTGAGGTATACACCAGAACAAGTTGAGGCTTTGGAAAGGGTCTATGCTGAATGCCCTAAACCCACTTCTTTA AGGAGGCAACAACTTATTAGGGAGTGTCCTATACTCTCTAACATTGAACCAAAACAGATCAAAGTTTGGTTTCAGAATAGAAGATGTCGTGAGAAGCAAA GAAAGGAAGCTTCTCGATTGCAAACAGTGAATAGAAAGCTATCTGCAATGAACAAGCTTTTGATGGAAGAAAATGATCGTCTTCAGAAGCAAGTCTCTCA TCTGGTTTATGAAAATGGTTACATGAAGCAACAGATAACCACTGTATCTGCAGCAACCACCACAGACAATAGCTGTGAGTCTGTGGTGATGACTGGTCAA AACCAACAGCAAAATATAACACCTCATCAGCATCCTCAAAGGGATGCTGACAACCCAGCTGGTCTTCTTGCCATCGCCGAGAAGACCCTGGCAGAGTTCC TGTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATTGTCGCTATTTCCCGCAACTGTAG TGGAGTAGCAGCACGTGCCTGTGGCCTTGTGAGCCTAGAGCCCACAAAGGTTGCTGAGATTCTTAAAGATCGACTGTCATGGTATCGTGACTGCCGATGC CATGATGTGTTGAGCATAGTTCCCACTGGAAATGGGGGCACAATAGAGCTCATTTACATGCAGACTTATGCGCCTACAACATTGGCAGCAGCACGTGATT TCTGGACACTCAGATACACTAGAAGTTTGGAAGATGGAAGTGTCGTGATATGTGAGAGATCGTTGACTACTAAAACGGGTGGCCCTACAGGACCACCATC TTCAAACTTCATAAGAGCCGAAATGCTTCCTAGTGGTTATCTTATCAGATCCTCTGACGGTGGTGGATCCATTATTCATATTATTGATCATGTTGATTTA AATGTCTGGAGCGTCCCTGAAGTATTGAGGCCCCTCTACGAATCATCAAATATCTTGGCTCAGAAATTAACTATTGCTGTAGAAATATTTTCTTGTTATA TCAATTTCATTTCCTTAACTATGTCCAAATTCGTTAATTAACTTTTTAAAATTCACAATATAGGCCTTGCAACATATAAGACAGATTGCACAAGAATCAA GCGGAGAAATTCAGTATGGTGGGGGGCGTCAGCCTGCTGTTTTGAGGAAACTGAGTCAGAGACTATGCAGGGGGTTCAATGATGCTGTGAATGGGTTTGT TGATGATGGTTGGTCTCTGATGGGTAATGATGGGGTAGAAGATGTGACAATAGCCATAAACTCATCTCCAAACAAATATTTAGGATCCGAGTCCAATTCG TCATTGTTCCCGTCAATTGGAGGTGGAGTCCTGTGTGCCAAAGCGTCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTAGCTTTTTGAGGGAGC ATCGGTCAGAGTGGGCTGATTATGGGGTTGATGCATACGCTGCCGCATGTCATAAGTCTAGTCCTTATGCAGTTCCTTGTGCAAGACCTGCTGATTTCCC CACAAGCCAGATCATTTTGCCTCTTGCTCATACAATTGAGCACGAGGAGTTTTTGGAGGTAATTCGAATAGAAGGTCATGCATTCCCCTCGGATAATGTA GCTTTGCCACCGGACATGAATCTCTTGCAGCTGTGCAGTGGGGTTGACGAAAACTCAATTGGGGCGTGTGCTCAACTTGTCTTTGCTCCTATTGATGAAT CATTTGCTGATGATGCTCCTTTACTGCCTTCTGGTTTTCGTGTTATACCATTGGCTCCTAAAACGGATGCTTCGGCCACAACTAGGACATTGGATTTAGC ATCAACACTTGAAGTAGGATCTGGTAATGATCGTCCAGCCGGTGAAGCTGACTATAGCCTTAGGTCGGTCCTTACTATCGCATTCCAATTTACTTTCGAG AACCATCTGCGAGACAATGTTGCTAGCATGGCTCGTCAATATGTGCGGAGTGTTGTGGGATCGGTTCAGAGGGTTGCCATGGCAATAGCCCCCTCTCGAC TCAGTACCCAGCTTAGGCCAAATTCTCTTCCTGGCTCACCTGAGGCTCTTACTTTAGCTCGATGGATCTGTAGAAGCTACAGGATCCACACTGGTACAGA ACTCTTCCGAGTCGAGTCGACATCTGGTGATGCAATCTTGAAGCAACTCTGGCAGCATTCGGATGCAATCATGTGCTGTTCTGTAAAAACAAATGCATCT CCGGTGTTCACCTTCACTAACCAGGCTGGACTTGACATGCTTGAAACCACTCTAGTTGCCCTTCAAGATATAATGCTTGATAAAGTTCTTGAAACCACTC TAGTTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_184998; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380123
| Blastp | Homeobox-leucine zipper protein HOX32 from Oryza sativa with 72.93% of identity |
|---|---|
| Blastx | Homeobox-leucine zipper protein ATHB-14 from Arabidopsis with 71.97% of identity |
| Eggnog | homeobox-leucine zipper protein(ENOG410XQ3R) |
| Kegg | Link to kegg annotations (4333544) |
| CantataDB | - |
| Mirbase | cln-MIR166 (MI0022568) |
| Ncbi protein | Link to NCBI protein (XP_019419795.1) |
| Pfam | MEKHLA domain (PF08670.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |