| Id Trinity | TRINITY_DN51478_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_381545 |
| Sequence | CTTTGCTTCTCTCTCTCAAAAAGCTACACCCTTTTCTTTCTCTCTGCTTCTTCTGTGTTCCAAAGGTTTCAAACGGAGAAGAAGAATAAGAAGCAAAGTG TAAAAAGATTTGAAAGGAATAAACAAATGATGGATGAATATTCTGGTAAAAGAACTACTGGTGCGGTGGTAGTTCCGAGAAAGGGAATGGGCCATGTCTT TAGAGATACTGCTAATACTAGAGACCGAAATGGTCAAGCTTGCAACCGCCTTGGTTGCAGTAGCAGAGTCAGCTCTCCTAAAGGTGCTCAAATCGGCTCT TCTGAGAAAGGTAAATCTCTGAGACCTTCAACCCGATCCTCTTCTAGTGTCAAGGAAGCAATGGGAAGTTCCTCTAGAACTTTCACAGGGACTAGTAACC CAGGAAAAACCTTTCTAAGGCCTCGGAAAACTTTGTCCTCTCAAGTAGAGGGAGATTCATCTGAAACAAGTAGCATACAGGATGAACCAGAACCTTCAAA CCTTGTCCCTCCACCTGAAAATATTAAGAGAGGGCTTCAAGCGGAAGTGGAAAATTCAGACTCTAGTGATGTCATGCCAATGGAAGCAGGGAGCTCTAGT GTAGCATCTAATACAAGATCTCGGAGGAATTTTCAGCCAAAGCCTGGATTGCGTGCTCAAGAAGTTAAAAGTGTCGGTCAAATTGTGCGTGCGGGTAACA GTAGGCCTGGGATGAGGAACCTCAGATGCAACTCTATATCTGATGTCATCCCATCAGGTGTCTGTTCATCATCTGATTCAACCCTTAACAGAAGCAAGGG TTTGATAAAAAAGAGAAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACTTAACTGGGCCTTCATTTGAGGGACGGAATTCTGCTTCCAGA AATGGAATATCTATCTCTGATTCAAGAAGATCCAGAAATACTCCTTCCCTCGGGGACAGGCCAGAGAGAAATGTAGCATCAGTTAGGACACGAAGAGCAG TGAGTGGTCAAGCCAGAGGAAGGTTATCCAACCAAGGAAATGCTAATCCTGTGGCACCCAATGACTCTCTTGCAACGATTACTCCTTTGCCACGTTCTGG CGGTCTTAATGCTCCTTGTCTATCACATCATTCTTCTGTGGAGGCTACTTTAAGTCGTCCAGGCTCTTATATTATGCCAGCTACTAGCAGTGAGGAGTTA TATGGTGTTATGCCCACGTCTCCTTCAGAATATGGCATAACTCGTTCTCTAATAGGTCGGGAGGGCTTTCGACGCCGCTACAATATGGATGGTATTGCAG AGGTAATGTTGGCACTTGAGAGGCTTGAACAAGATGTTGAGCTAACACACGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTAATGGACTGAGTTT CTATGATCAGCATAGAGACATGCGGCTGGACATTGATAACATGTCATATGAGGTTTGTTAATGTCATAAGGTGCCGCAATTAGATTTGTTATATTTGTTT GTTTAATTTCCCCTCATTTTTCTTATAATATCTATATTATGGTTTGAGAGCTTTCCATTACAAGAGTCTTGGATGAAAACATTAACAATGCATGTTTTTG AAGCAAATATGGCATGAAGTTAATTTGGGGTTATGAAACTATTTTTATTTTTAGCTATTCTCATCTCTTGGTTTTATGTAATTGAAGGAACTGTTAGCTT TGGAAGAGAGGATTGGTAATGTGAGCACTGCTCTCACAGAGGAAGCACTATCAGAATGTCTGAAGAGAAGTTTCTATCAACCCTCACCCTCAGAGGATGA AGCCGAGAGTTGCAATGAGCATAAGAATGACACCAATTGCAGCATCTGCCAGGAAGAATATTTGGTTGAAGATGAAGTCGGGAGTCTGAAATGCGAGCAT AAGTATCACGCGGTCTGCATACAGCACTGGCTGAGGCTGAAGAACTGGTGCCCTATTTGTAAAGCACCAGTAGGGCCTTCAAATTCACCATCTTCATCAC ATTAATTGCACTGCATTGCATTGTTAGGCTATAGACAAAATTCAGTTTCTACCCACCTCATTTTCTTTATATTTGTTATCACTTTTGTACAAAATTCAGT TTCTCCTCCTTGCCTTTTCTTATTGGTCATTTGTACAGATATTACATCTCCATTATAACTTAATAACACAAGCCAATGGCTTGATAGACTCAAACATCTT CTTAAACTTTGGGTCCAATAGTCCCATCTAAATAAATGTCCTTCCATAATGTCTTTTTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_185211; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381545
| Blastp | - |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MBR1 from Arabidopsis with 45.83% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438353.1) |
| Pfam | - |
| Rfam | - |
| GO | - |