Ll_transcript_380968

• Id Trinity: TRINITY_DN51499_c0_g1_i12
• Name Transcript: Ll_transcript_380968
• Sequence: AAGCAAGTAAAGACACATATCACTACAAATTTCTGTGTTAATGACATTGTCAGCAAATTCTCCCTATGCCCTAGTCTCTAGTATAGCAAACAACAGTACT TTTTCTTATTTATTCCAACTCCATTATTCAAACATTATATATTTTCTTATTCCTTTAAAGTGTTGTAGTCTTCATAACAAAGTACTTCATCACATGATGA TTGACCATTCCTTAGACCCTTAAAAAGATGGCACTATATTATAGTATATGAAAAACTTTCAGGATTGCCACCTCTCTAAACAAACAATAGTTGACCCCTA ACATGGAAACCAAGTTCAGAATCAGTTGTCACAGAAATGAGTTGGTTCCAAACAATGACACTCATTTTCCAGAGAGTCCTAGAGTGCCAATGGAGTTTCT ATCAAGGTCATGGAGTGCCTCTTCCATTGAAGTCTCCAAAGCTCTTCAGCCACCTCAACCTTCTTCTTCCAAGCCTCCTAACTCTATTCCTGAAGAAACT ACTGCTTATTCTGAACAACTCTCAACTATGTCTGGGAACCAGTTTTCTTTTGCTTCTTCTGCTACTTCACAACTTGTCCTTGAACGCATTATGTCACAGT CCACAAGAGAGGAAGTGTCTCCATTAACATCAGGTAGATTATCTCATAGCAGTGAACCCTTGAATGGTGGTGGTTCTTTAACAGGAACAGATAGTCCACC CATTTCTCCCTCTGATGAATATGATGATGTTGTTAAGTTTCTTAAGGCAAACAATTCCATTAACTCATTATTCAATGGTGGAATAGCCATGGGTGGTACT GGTTGTGTCACTCCTTGTTCTGGTCCTAAAACAGTTGGAAGATGGTTGAAGGAAAGAAGAGAAAAAAAGAAAGAAGAAAACAGAACTCATAATGCTCAAC TACATGCTGCTATTTCTGTGGCTGCTGTGGCATCCGCAGTTGCAGCCATAACAGCTGCAACAGCAGCATCATCTGCAACTAGTAAAGATGAGAAGATGGC CAAGACAGACATGGCTGTGGCTTCTGCAGCCACATTAGTTGCTGCACAGTGTGTTGAGGCTGCTGAATCAATGGGAGCTGAAAGAGAACACCTTGCTTCT GTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACTCTCACAGCTGCAGCTGCCACTGCTCTAAGAGGGGCAGCAACTTTGAAAGCAA GGGCATTGAAGGAGGTGTGGAATATTACTACAGTGACACCAATTGAGAGAGGCATAGGGATTGGACTATGTGGTAAAGGCAATAACAACAGTAACTCTAG CACCAGTGATAGTGGAGAGATTGTGAATGGAGATAATTTCCTGAGTGCCTGTAGTCAAGAGCTCCTTGCTAAGGGTACTGAGTTACTGAAAAGGACCCGA AAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATATACACAGAACCGGACAGGTGATGCTGAAAATGAAAAGCAAACATGTTGCAGGAACCATTACTA AAAAGAAAAAGAATATTGTGTTGGATGTGTGCACAAATATACCAGCATGGGCAGGAAGGCATCTTTTTGATGATGGTGAAAAAAGAAAGTATTTTGGTTT GAAGACAGAATCAAGAGGAACTGTGGAATTCGAATGCAGAAATCAAAGAGAATATGATATATGGACTCAAGGGGTTTCTAGACTTCTTTCCATTGTTGCA AAAAGGCAAAACAGATAATGGGATTTGAACAACTCAAGTCTAACTGCTCAACTTATATATCTTGTTGCCATCTCCTTTTAAGAACTAATGGATTTTGTAA CTCTAGAATGAACTTACTATGTAATGTCTAAATTTATGGATTTCTACGATTTCTATCTAGAGTGCAGATCATAAGGTCAAGGAATCAAAAATAAAAATAT TAAAAATATAAACATTAATTAATGTCTAACACAAATACTGTGATAATAGCTTAGCATGGTTCCTTATAAATGTTACTACCAATCCCGCAAAAGCTAAGAT TATTAACAGGTGCATGTTGTTAG
• Tissue: pods
• Gene name: LI_gene_185378;
• Additional information: details;

Expression of Ll_transcript_380968

FPKM

• PAB: 0.1
• PNAB: 12.1
• PS1: 4.8
• PS2: 2.2
• PS3: 1.1
• PW1: 3.6
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380968

• Blastp: VAN3-binding protein from Arabidopsis with 64.92% of identity
• Blastx: VAN3-binding protein from Arabidopsis with 64.5% of identity
• Eggnog: Plant pleckstrin homology-like region(ENOG4111DWT)
• Kegg: Link to kegg annotations (AT3G63300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428125.1)
• Pfam: Auxin canalisation (PF05703.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;