Ll_transcript_299204

• Id Trinity: TRINITY_DN51501_c1_g1_i15
• Name Transcript: Ll_transcript_299204
• Sequence: CATTACAGAAGCGCGACCTTCACTGAGTCTGAAGTGGACAAAGGAGTTTCTTTCTCTTTTTTCCTTCAAATTTCAAAACCTAATCTCACACCTTTTTCTC TTCCTCATTTCACTCGCTTAGGTTAGAATCAGATCCCTAATTCCCTACCTCACTTTTTCTCATCCCGAGAGAAAAAGGAATTCCAATGAAACTTTGAATC GCGTGTTGATCTCTTATTGTGATGAATAAAAACTCTGAAACCATAAAGCTGATTATTTTTTGTTTTATTTGATCTGGTGTGTGTTTTCCAATAGAGAAAG AGAAGCTGGTGTATGGTGATGGGTTCGAAGATTGAAGGACAATCTACGCCAGCAAATCGACGTGATCCTTATGAGGTTTTATCTGTAACAAGAGACTCTA CAGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCCGAGGCTTCAGAACTATTTAAGGAGGT CGCATATTCTTACAGCATATTGTCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTCAGGCACTTGATGCTGATAGCATGGACATGGAAATT GACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTTCCGTTTCAGCCAATGTACTTGAAG AAGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGCGTGACAAT AAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGTGGT TATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTG TGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTGGCACTCA TATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCACAATCCCATGAAGATACCACCCAAAAGCTTATG GACATTGAGGCTCAAATTTTAAGAAAGAGGAACGAGCTACACCAATTTGAAGCAGAATATAGAAAGGCAGTGGCACGCTATCAGGAAGTGACAGATAGAT ACACAATAGAAAAACAGTCTGTACGTTCTTTCAACTTGTGCTACAGTTACAACACAAGTGCATATCTTGAAATCCACACATTTGCTTTCTTTTTACTACT AATTTTCACAGCTTAGATTAAAATTATTTGAAAAGATCATATCTTTTACATTGAGTTGTGGCAAGCTAGATAAATTAGAAAGATCATATCCCTGCTAGTT TGACTGGCCAAAAATAAATAATAGAGCCCATAATCGGTAATGTCACAGAAGAAGGGTTTCCAAGGGGGAATAAACAATTCAATTGTTGTGTCTCCAAGGT ATATTATTATGTGAAATATGATGCACGAAATGTCAGATAAACCACTATCCTAAAGGTGTCGAGATCCAATTGCAAGGTATGAAACTTGACTCTCACATTG GGATTTTATAAGGCCTACTCCCAGGGTTCTTACTTAGGTTGAAGCATGAATAAAGCACATGCAACTCAAACCTTGGTCTGGAAATATAATTTGAATCAAA AGAATGGGACAGAAAGTATCGGACTCTTGGTTTCTTAGTCATAGAGGCTGCAATGCCACATTAAAGAACCATGACTCCTAAATTCTTAAGAAGCTCTTCA GGTGAAGAACCAGAAATGGTTTATACCTCTAGCCAGAAGTAAATTGTCTAGCAGTCACTGACCAGATGACTTATAGCTGCTCACAAATGCAATGACAAAT TATTTACACTTCTGGAGGTTATGCTTATGCATGTTTTCCATTAAAGTTTTCTTTGTTTGTTTTCTTCATGTCATGCTATAAGCTCAAAAACTTATAACAT ATAGAGAATATGATTGTTTTATCGTTTGAAAGGTAGCTACTCTTATGTTTGACCTGACCCAAGATGTAATTTATGTTTATGACCTTGTTGAGTCTTATTT GCTACACAGGTAGATGAGCTTCTGAAACAAAGGGACAGTATTCATTCTTCCTTCACCGTTGTCAAGTCAATCAATATTAGTGGGAGTGCTAGTAATTTAA GCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGGAAGCCCTGAGGATGGTGGGTCAGATGGAAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAA TCTTAAGGGTTCCTGATAAGAGGTTGATTAAAGTCATGACATCAAACTTAGCATCCTGTTACATACCTGGAATACTTTCCTTCTTTGCTTGGTTCCACCA AGGTTGTAAACTGGTTTATTGGTCTATTCTTTAGTATGTGGTTGCACTCAAAGGTATATGTCTCTTCCTGTTACCATTTTTTTGGTCATCCAATGAGATT CATCTGATTCCCCGACATATATAGTTTTGATACTGTAATGATATAATTCATTCTTGTAATAGTTTTGTTCATATTACTCTTTATATTATGTAATGCCAAC TTTGTCAAACAGAATATCAGTAAATTAGTCTATATAAGATGTTTACATAATACCCCG
• Tissue: pods
• Gene name: LI_gene_185396;
• Additional information: details;

Expression of Ll_transcript_299204

FPKM

• PAB: 1.5
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.7
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299204

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 86.14% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 86.14% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441409.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;