| Id Trinity | TRINITY_DN51501_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_299208 |
| Sequence | GTAAATTTAAATAAAAAATATTGGGTGGCTTATGAGTGGAACACTTGAAGTCTTGAACCCGACCCTATAAGAAAAAACCCATGAAAAATTAAGGCACCAT GATTTAAAAAATAAAATATTTATATTATGTTATTTTTATTTAAGAGTTAATAATAATATAAAAACTCCTACAATATTATATGAAAATGAAAAGAAAATAA ATAAAAAGAATTGAAAAAAGTACAACATCCCTGTGATTAGTCGTATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAA CGAGTATCTCTTCTTTTTCCCCTCTAAATTCAAAACCTAATCTCATCCAATCACATGTTTATAACATGTCATATTAGTCTCTGAAACCTGATCATTATTA TTTGTTTGTTTTGTTTGAATTGATGTATGCTTTCAAATAGAGAAAGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACA AATCGACGTGACCCTTACGAGGTTTTATCTCTCACAAGGGACTCTACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGG ACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAGGTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAG TGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAGGTGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAG CTGGGTGTTCCTATCAAGACTACTATTTCAGCTAATGTACTTGAAGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCAATTGGAACATCAGTTA CTGGAAAGGTTATTACTTCCTCCATGATGAATGAATCAATAAGTAGTCTTCATGGTGGTGTATTTGTTCTACTTAAGTCACAATTTTTTGCAGGTAGAGA AGCAGTGTGCTCATTTTTTTGGTGTGACAATAAATGAGCTGCAAGCTGAGTCAGGGATTGTTATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTT GCTCTACTTTGAACATGATGCAAATGGTGGCTATGGTTTGGCATTACAGGAAGATAGTGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTA CATTTTCAAGTGTACAGAATGGATTCAACTGTGAATACGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTT GTGAAGTCTCCGAACTGAAGCCTGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGTTATACAATTGAGGCAGTATGTGCAAA ATCACATGAAGATACCAACAAAAAGCTTATGGACATTGAGGCTCAAATATTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGTT TGTGTTGGTTTTTGTCGATCGTGATTTAAAGTTTGCTCAGAGGCACTTACAGTGTATTTTTTCTAATACTTTCAGGCATTGGCACGTTATCAAGAAGTGA CAGACAGATACACAAAAGAAAAACAGTCTGTACGTTCTTTCAACTTGTGCTACAGGACAAGTGCATATCTGGAAATCCACACATTTGCATTATTTTTAGT ACTAATTCTGCCCAGTTTAGTTAAAAATTAGTTGAGAAAATAACATATGTTCCACTTGAGTTGTGAGGCTAGATCAGTTGGGACAATCATATCACTACTT GCTTGGTCGGGCCAAAGTAGAGCACCAAAGCCCATAATTTGTACCATCACAGATGTATAAGTTTTAAAGGGGAAAAGGGAAATAAGTCAATTCTTGTGTC ATAAGATGCTCATCTTAGGCTGGCCTTAAATGTACATTATTCTGTGAAGATGATGTACGAAATGTCATAGAAACAACTATCCTAAAAGGTAACTGTTAGG ACCAATTTGCAAGGGATAGGACTCAAGTCTGATTTGGGAGTATGGAATTCAAATGTGGGGTTTATAAGACCTTGGACCTCTCATGGTTCTTATCAATAAC CTATTAGGTGTATACCCAAGAATGGTTTAAATCTCTAAGATGTAATTTATGTTTGTGACTGTGTTGGGTCTTTTATTTGCTACGCAGGTAGACGAGCTTT TGAAACAAAGGGACAGTATCCATTCTTCCTTCACCATTGTCAAGTCAACCACAATTAGTGGGAGTGCTAGTAATTTAAGCAATGGAAGTTCTAGCAAAAT TTCTGGTGAAGAGAGCCCTGAGGATGGAGGGTCAGATGAGAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTCAAGGGTTCTGATAAGAAG TTGATTTAAAAGTCACTTGATTTTGCTGGTCTCTATCAATTACAGTCATGGCATCAAACTTAGCATCCTGTGGATGTTCCCCTTGCATTATATATCTGGA ACATGTCCCTTCTCTGCTTGGTTACACCAAGGTTGTAAACTGGTTTTGTTAGTCTATTCATTAGTATTGCACTCTATGTCAAAGGCATATATATATGTCT CTACCTGTTTCCAATTTTTTGTAATCCAATTCCAATGTAATACTGTGGACATATATAGTTTTGATACTGTAATGGTAATATTCATTCTTGTAACAGTTTT GTTCATCATTACTATTTATCATCTATGATGCCAACTTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_185396; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299208
| Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 84.25% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 69.42% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G68370) |
| CantataDB | Link to cantataDB annotations (CNT0000899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428816.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |