| Id Trinity | TRINITY_DN51501_c1_g1_i36 |
|---|---|
| Name Transcript | Ll_transcript_299225 |
| Sequence | GTAAATTTAAATAAAAAATATTGGGTGGCTTATGAGTGGAACACTTGAAGTCTTGAACCCGACCCTATAAGAAAAAACCCATGAAAAATTAAGGCACCAT GATTTAAAAAATAAAATATTTATATTATGTTATTTTTATTTAAGAGTTAATAATAATATAAAAACTCCTACAATATTATATGAAAATGAAAAGAAAATAA ATAAAAAGAATTGAAAAAAGTACAACATCCCTGTGATTAGTCGTATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAA CGAGTATCTCTTCTTTTTCCCCTCTAAATTCAAAACCTAATCTCATCCAATCACATGTTTATAACATGTCATATTAGTCTCTGAAACCTGATCATTATTA TTTGTTTGTTTTGTTTGAATTGATGTATGCTTTCAAATAGAGAAAGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACA AATCGACGTGACCCTTACGAGGTTTTATCTCTCACAAGGGACTCTACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGG ACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAGGTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAG TGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAGGTGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGGTGT GAAATGCGAATGTAGTAGACGGCCACTTGATTTTCTAAATTATTTATTTTCCTTTGTTTCTTATCCTACCTGGTTATAGCAAGCTGGGTGTTCCTATCAA GACTACTATTTCAGCTAATGTACTTGAAGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGAGAAGCAGT GTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCACGATCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTA CTTTGAACATGATGCAAATGGTGGCTATGGTTTAGCGTTACAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTT CAAGTGTACAGAATGGACTCAACTGTAAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAG TCTCAGCACTAAAGCCTGGCACTCATATCTTTGCTGTTTATGGTCTGAATAGTTTATTTACTGTTATTTTGGTTGCTTGGGCTATTTTTTCAAGTAAACT ATTTGTTACATTTACACTGATTTAAGTTGATATTGTTTAGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCACAATCCCATG AAGATACCACCCAAAAGCTTATGGACATTGAGGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_185396; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299225
| Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 81.31% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 16 from Arabidopsis with 65% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G68370) |
| CantataDB | Link to cantataDB annotations (CNT0000899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428816.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |